Gene SeHA_C3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3907 
Symbol 
ID6490081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3777058 
End bp3779100 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content56% 
IMG OID642744014 
Productoligopeptidase A 
Protein accessionYP_002047620 
Protein GI194449661 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones105 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC CATTACTAAC GTCTTTTTCA CTGCCGCCTT TTTCTGCAAT TAAACCGGAG 
CATGTGGTGC CTGCGGTCAC CAAAGCGTTG GCCGATTGCC GGGCGGCGGT AGAAGGCGTT
GTGGCGCATG GCGCGCCGTA TAGCTGGGAA AACCTCTGCC AGCCGTTGGC GGAAGCCGAC
GATGTTCTGG GGCGTATTTT CTCGCCAATT AGCCACTTAA ACTCGGTGAA AAATAGCCCG
GAGCTGCGTG AAGCCTACGA ACAGACGCTG CCGCTGTTGT CGGAATACAG CACCTGGGTT
GGACAGCATG AAGGACTGTA CAACGCGTAC CGCGACCTGC GCGACGGCGA TCATTACGCC
ACGCTGAATA CCGCGCAGAA GAAAGCGGTT GATAACGCGC TGCGTGATTT TGAACTGTCC
GGCATCGGTC TGCCGAAAGA GAAACAGCAG CGTTACGGCG AAATCGCCAC TCGCCTGTCT
GAGCTGGGCA ACCAGTACAG CAATAATGTG CTCGATGCCA CCATGGGCTG GACGAAGCTC
ATCACCGACG AAGCCGAGCT GGCGGGAATG CCGGAAAGCG CTCTGGCGGC AGCGAAGGCC
CAGGCGGAAG CCAAAGAGCA GGAAGGTTAC CTGCTGACTC TGGATATCCC GAGCTATCTG
CCGGTCATGA CCTACTGCGA CAACCAGGCG TTGCGCGAAG AGATGTATCG CGCCTATTCC
ACTCGCGCCT CCGACCAGGG GCCGAACGCC GGTAAGTGGG ATAACAGCCC GGTGATGGAA
GAAATTCTTG CGCTGCGCCA TGAACTGGCG CAACTGCTGG GCTTCGAAAA TTATGCCCAT
GAATCGCTGG CCACCAAAAT GGCGGAAAAT CCGCAGCAGG TGCTCGATTT CTTAACCGAT
CTGGCGAAAC GCGCCCGTCC GCAGGGGGAA AAAGAGCTGG CCCAGCTGCG CGCCTTCGCC
AAAGCCGAAT TTGGCGTTGA GGAGCTGCAA CCGTGGGATA TCGCGTACTA CAGTGAAAAG
CAAAAACAGC ACCTGTACAG CATCAGCGAT GAGCAGCTAC GCCCGTACTT CCCGGAAAAC
AAAGCCGTGA ATGGCCTGTT TGAAGTGGTG AAACGTATTT ACGGCATCAC CGCCAAAGAG
CGTACTGACG TTGATGTCTG GCACCCGGAA GTGCGTTTCT TTGAACTGTA TGACGAAAAT
AACGAGCTGC GCGGCAGCTT CTACCTTGAC CTGTACGCGC GTGAACACAA ACGCGGCGGG
GCGTGGATGG ACGACTGTGT CGGCCAGATG CGTAAGGCGG ACGGCACATT GCAAAAGCCG
GTCGCTTATC TGACCTGTAA TTTCAACCGT CCGGTGAACG GTAAACCCGC TCTGTTTACC
CATGACGAAG TGATCACCCT GTTCCACGAG TTTGGTCATG GCCTGCATCA TATGCTGACC
CGCATTGAGA CCGCCGGGGT CTCCGGTATC AGCGGCGTGC CGTGGGACGC GGTCGAACTG
CCAAGTCAGT TTATGGAAAA CTGGTGCTGG GAGCCGGAAG CGCTGGCGTT TATCTCCGGC
CACTATGAAA CCGGCGAGCC GTTGCCGAAG GAACTGCTGG ATAAAATGCT GGCGGCGAAA
AACTATCAGG CGGCGCTGTT TATTCTGCGT CAGCTGGAGT TCGGTTTGTT TGATTTCCGT
CTGCATGCGG AATTTAATCC GCAGCAAGGA GCGAAAATTC TTGAGACGCT CTTTGAAATC
AAAAAACAGG TCGCCGTGGT GCCGTCACCG ACATGGGGCC GCTTCCCACA TGCGTTCAGC
CATATCTTTG CTGGCGGCTA TGCGGCAGGC TACTACAGCT ATCTGTGGGC CGACGTACTG
GCGGCGGACG CTTATTCCCG CTTTGAGGAG GAAGGCATTT TCAACCGTGA GACCGGTCAG
TCGTTCCTTG ATAACATCCT GACTCGCGGT GGTTCTGAAG AGCCGATGGA ACTCTTTAAA
CGCTTCCGTG GCCGTGAACC ACAGCTGGAC GCGATGCTGG AGCATTACGG GATTAAAGGC
TGA
 
Protein sequence
MTNPLLTSFS LPPFSAIKPE HVVPAVTKAL ADCRAAVEGV VAHGAPYSWE NLCQPLAEAD 
DVLGRIFSPI SHLNSVKNSP ELREAYEQTL PLLSEYSTWV GQHEGLYNAY RDLRDGDHYA
TLNTAQKKAV DNALRDFELS GIGLPKEKQQ RYGEIATRLS ELGNQYSNNV LDATMGWTKL
ITDEAELAGM PESALAAAKA QAEAKEQEGY LLTLDIPSYL PVMTYCDNQA LREEMYRAYS
TRASDQGPNA GKWDNSPVME EILALRHELA QLLGFENYAH ESLATKMAEN PQQVLDFLTD
LAKRARPQGE KELAQLRAFA KAEFGVEELQ PWDIAYYSEK QKQHLYSISD EQLRPYFPEN
KAVNGLFEVV KRIYGITAKE RTDVDVWHPE VRFFELYDEN NELRGSFYLD LYAREHKRGG
AWMDDCVGQM RKADGTLQKP VAYLTCNFNR PVNGKPALFT HDEVITLFHE FGHGLHHMLT
RIETAGVSGI SGVPWDAVEL PSQFMENWCW EPEALAFISG HYETGEPLPK ELLDKMLAAK
NYQAALFILR QLEFGLFDFR LHAEFNPQQG AKILETLFEI KKQVAVVPSP TWGRFPHAFS
HIFAGGYAAG YYSYLWADVL AADAYSRFEE EGIFNRETGQ SFLDNILTRG GSEEPMELFK
RFRGREPQLD AMLEHYGIKG