Gene SeHA_C3898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3898 
Symbol 
ID6489110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3766072 
End bp3768813 
Gene Length2742 bp 
Protein Length913 aa 
Translation table11 
GC content58% 
IMG OID642744005 
ProductABC transporter permease and ATP-binding protein 
Protein accessionYP_002047611 
Protein GI194451873 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCGC TGAAGCTGGT GCCTGTTCCT CCCGTGGCGC AGCTTGAGGG GGTGAGCCAG 
CATTACGGAA AAACAGCCGC GCTGAACAAT ATCACGCTGG ACATTCCCGC CCGTAGTATG
GTCGGGCTGA TTGGTCCGGA CGGGGTGGGT AAGTCGAGCC TGCTGTCGCT GATTTCTGGC
GCGCGGGTGA TTGAGCAAGG GAACGTTATC GTCCTGGGCG GGGATATGCG CGATGCGAAA
CATCGCCGCG ACGTCTGTCC GCGCATCGCC TGGATGCCGC AGGGGCTGGG GAAAAACCTT
TATCACACGT TATCGGTTTA TGAGAACGTC GAGTTTTTCG CTCGTCTCTT TGGTCATGAC
AAAGCTGAAC GCGAAGCGCG TATTACCGAG CTGCTGAACA GCACCGGCCT GGCGCCGTTT
CGTGACCGTC CTGCCGGGAA GCTGTCCGGT GGGATGAAAC AAAAGCTGGG GCTGTGCTGT
GCGCTGATTC ATGACCCGGA ATTGCTGATT CTTGATGAGC CTACCACCGG CGTGGACCCG
CTCTCCCGCG CTCAGTTCTG GGACTTAATC GACAGTATCC GCCAACGGCA GACCAATATG
AGCGTGTTGG TCGCAACGGC CTATATGGAA GAGGCGGAGC GTTTTGACTG GCTGGTGGCG
ATGAATGCGG GCGAGATACT GGCAACCGGC AGCGCGCAGC AACTGCGGGC AAAAACCCAT
AGCGCGACGC TGGAACAGGC GTTTATCGCC CTGTTGCCAG AAGCGCAGCG CCAGGCGCAT
AAGCCAGTGG TGATCCCGCC GTATCACGCT GAGCAGGAAG AGATTGCCAT TGAGGCGAAA
GATCTGACCA TGCGCTTCGG TAAGTTCGTC GCGGTTGACC ATGTTAATTT CCGCATTCCG
CGCGGCGAGA TTTTTGGCTT CCTCGGTTCA AACGGTTGCG GCAAATCGAC CACCATGAAA
ATGCTGACCG GTCTGCTTCC CGCCAGCGAA GGCCAGGCCT GGCTATTTGG CCAGCCGGTA
GACCCGAACG ACATCGATAC CCGTCGCCGG GTCGGGTATA TGTCGCAGGC TTTTTCGCTC
TATAACGAAC TCACCGTGCG GCAGAATCTG GAACTTCATG CCCGCCTGTT TCATATTCCG
CCAGCGGAGA TCCCGGCGCG CGTCGCGCAG ATGATCGAAC GCTTTATGCT AACGGAGGTG
GAAGATACGC TCCCCGCTTC GTTGCCGCTC GGTATCCGCC AGCGTTTATC GCTGGCGGTA
GCGGTGATCC ATCGCCCGGA AATGCTGATT CTTGATGAGC CAACGTCCGG CGTTGATCCG
GTCGCCAGGG ATATGTTCTG GCAGCTTATG GTCGATCTTT CGCGTCAGGA TAAGGTGACG
ATTTTTATCT CGACCCATTT TATGAACGAA GCGGAACGTT GCGACCGAAT GTCATTGATG
CACGCCGGTA AAGTGCTCGC CAGCGGTACG CCGCAGGAAT TGGTGCAACA GCGGGGCGCG
GCCAATCTGG AAGCGGCGTT TATTTCCTGG CTACAGGAAG CTGCGGGAGC GGCGCCTGAA
ACCCCAATAC CGCCATCCCA GACGCCCGCC GCGTCAGGTA AACCGTCGCG GCAGGGATTG
AGCTTCCGGC GTTTGTTCAG CTACAGTCGC CGCGAAGCGC TGGAGCTACG CCGCGATCCG
GTACGCTCGA CGCTGGCGCT GCTGGGAACG GTAATTCTGA TGCTGATTAT GGGCTATGGC
ATCAGTATGG ACGTGGAGAA CTTGCGTTTT GCCGTACTCG ACCGCGATCA AACCGTCAGC
AGCCAGGCAT GGTCGCTCAA TCTGGCGGGA TCGCGCTATT TTATCGAACA GCCGCCGCTC
GCCAGCTATG ACGAGCTTGA CCGGCGGATG CGTTCGGGAG AGTTGGCGGT TGCCATTGAG
ATCCCGCCTA ATTTTGGCCG CGATATTGCT CGCGGTACGC CAGCGCAGAT TGGCGTCTGG
GTGGATGGCG CCATGCCCAG CCGCGCCGAG ACGGTGAAGG GGTACGTTCA GGCGATGCAC
CAAAGCTGGC TGCAGGAGGC GGCAAGTCGT CAGCCGAACC CGGTTAAACA GGCCGGGCTG
CTCAACATTG AAACGCGCTA TCGTTATAAC CCGGATGTGA AAAGTCTGCC CGCTATCGTT
CCGGCGGTCA TTCCGCTGCT GCTCATGATG ATCCCGTCAA TGCTTAGTGC CCTGAGCGTG
GTGCGGGAGA AAGAGCTGGG GTCGATGATT AATCTGTACG TAACGCCGAC GACGCGCAGC
GAATTTTTGC TGGGTAAACA ACTGCCGTAT ATCGCGCTGG GTATGCTGAA CTTCTTGCTA
CTGTGCGCGC TGTCGGTCTT TGTGTTCGGC GTGCCGCTGA AAGGCAGCTT TCTCACGCTT
ACCCTCGCGG CGCTGCTTTA CGTCATCATC GCCACCGGTC TGGGGCTGCT GATCTCCACG
TTTATGAAGA GCCAAATCGC CGCTATTTTT GGGACGTCGA TTATTACCCT CATTCCGGCA
ACACAATTTT CCGGCATGAT CGATCCGGTG GCTTCGCTGG AAGGACCGGG AAGATGGATC
GGTGAGATCT ACCCGACCAG CCATTTTCTG ACGATCGCGC GCGGGACGTT TTCCAAAGCG
TTGGATCTGT CCGATCTCTG GCCGTTATTT ATGCCGTTAC TGATTGCCGT CCCGGTGGTG
ATGGGTCTGA GCATTCTGCT GCTGAAAAAA CAGGAGGGGT AA
 
Protein sequence
MTSLKLVPVP PVAQLEGVSQ HYGKTAALNN ITLDIPARSM VGLIGPDGVG KSSLLSLISG 
ARVIEQGNVI VLGGDMRDAK HRRDVCPRIA WMPQGLGKNL YHTLSVYENV EFFARLFGHD
KAEREARITE LLNSTGLAPF RDRPAGKLSG GMKQKLGLCC ALIHDPELLI LDEPTTGVDP
LSRAQFWDLI DSIRQRQTNM SVLVATAYME EAERFDWLVA MNAGEILATG SAQQLRAKTH
SATLEQAFIA LLPEAQRQAH KPVVIPPYHA EQEEIAIEAK DLTMRFGKFV AVDHVNFRIP
RGEIFGFLGS NGCGKSTTMK MLTGLLPASE GQAWLFGQPV DPNDIDTRRR VGYMSQAFSL
YNELTVRQNL ELHARLFHIP PAEIPARVAQ MIERFMLTEV EDTLPASLPL GIRQRLSLAV
AVIHRPEMLI LDEPTSGVDP VARDMFWQLM VDLSRQDKVT IFISTHFMNE AERCDRMSLM
HAGKVLASGT PQELVQQRGA ANLEAAFISW LQEAAGAAPE TPIPPSQTPA ASGKPSRQGL
SFRRLFSYSR REALELRRDP VRSTLALLGT VILMLIMGYG ISMDVENLRF AVLDRDQTVS
SQAWSLNLAG SRYFIEQPPL ASYDELDRRM RSGELAVAIE IPPNFGRDIA RGTPAQIGVW
VDGAMPSRAE TVKGYVQAMH QSWLQEAASR QPNPVKQAGL LNIETRYRYN PDVKSLPAIV
PAVIPLLLMM IPSMLSALSV VREKELGSMI NLYVTPTTRS EFLLGKQLPY IALGMLNFLL
LCALSVFVFG VPLKGSFLTL TLAALLYVII ATGLGLLIST FMKSQIAAIF GTSIITLIPA
TQFSGMIDPV ASLEGPGRWI GEIYPTSHFL TIARGTFSKA LDLSDLWPLF MPLLIAVPVV
MGLSILLLKK QEG