Gene SeHA_C3859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3859 
Symbol 
ID6488199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3729773 
End bp3730987 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content41% 
IMG OID642743966 
Productribokinase 
Protein accessionYP_002047572 
Protein GI194451012 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID[TIGR02152] ribokinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTG AACGCCATCA TAGAATATTG AAGGAACTCA GTATTTCGGG AGTTGTAAAA 
GTTTCAAATC TGGCGAAAAG TCTCAAGGTA ACAAAGGAAA CTATTCGTTC AGATCTCAAT
GAACTTGCCG GACAGGGATA TCTTACTCGC TGTCATGGTG GTGCATTTAT TACCCTTGAT
TCTCTTGATA ACGTCGCAAA AAATGAAATT GCTTATGTGC TGGAAAAATA TGAATCAGCG
CAGAAAATAA AAAAAGGTCT CTCTGCCATG AAAAATAATG TATGTGTTAT TGGCTCGTTC
AATGTTGATA TTATCAGTTA TCTACCGAGA TTACCCTCAA CGGGAGAATC ATTGCTGGCC
GATAAATTTA TTTTTTCACC CGGCGGTAAG GGATGTAATC AGGCATTAGC AGCAAGCTAT
GCCGATTCTG ATGTGCATTT TATTACTAAA GTCGGCTCAG ATCATTTTAG TGATTACGCC
ATTAATTTTA TAAACTCATC AAAAATCCAT AAAAGTGTTA TCTACCAGAC CAAAGAAACA
CAAACAGGTA CAGCAACCAT CATGGTGAAT GGAGATACCG GAGATAACGT CATCGCTATC
TACCCTGGCG CCAACATGAC AATTTCCCCT GATGAAATCA CCATTCAGAA AGAAGCCATT
GTTCATTCAG ATATTGTTCT TGTCCAACTG GAGACGAATT ACGAAGCGCT GCAGCAAACA
ATTCGTCTCG CACAAAAAAA TGACATACCG GTCATCATCA ATCCAGCGCC GTACAATGAC
ATGGTTAACA CCATCATTGA TAACATTGAT TATATTACGC CAAATGAAAC GGAAGCAGGC
CTGCTGGCCA ATATGGCGGT TAATGATATC GAATCAGCCA AATGCGCGGC CAAAATTATT
CATCAGAAAG GCGTCAAAAA TACCATTATT ACATTAGGTA GCAAAGGTTC GCTTGCTTAT
GATGGCACAC AATTCATCTA TTCCCCGGCA TTTCCGGCAG TTGTAAAAAA TACGGCGGGA
GCGGGTGACG CTTTCAATGG CGCCCTCGCA TCTGGTCTTG CAAAAGGAAA GTCACTGGCA
TCCGCATTGT GCTACGCCAG CGCATTTGCC TCACTTGCGG TTGAAACGCC TAATGCCTCT
GATATGCCGG AAAACGACTC CGTTCTTCAT CGTATTCAGG GTTCACATTA CAAACAAACT
ATCTCTACTC ACTAA
 
Protein sequence
MKFERHHRIL KELSISGVVK VSNLAKSLKV TKETIRSDLN ELAGQGYLTR CHGGAFITLD 
SLDNVAKNEI AYVLEKYESA QKIKKGLSAM KNNVCVIGSF NVDIISYLPR LPSTGESLLA
DKFIFSPGGK GCNQALAASY ADSDVHFITK VGSDHFSDYA INFINSSKIH KSVIYQTKET
QTGTATIMVN GDTGDNVIAI YPGANMTISP DEITIQKEAI VHSDIVLVQL ETNYEALQQT
IRLAQKNDIP VIINPAPYND MVNTIIDNID YITPNETEAG LLANMAVNDI ESAKCAAKII
HQKGVKNTII TLGSKGSLAY DGTQFIYSPA FPAVVKNTAG AGDAFNGALA SGLAKGKSLA
SALCYASAFA SLAVETPNAS DMPENDSVLH RIQGSHYKQT ISTH