| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3847 |
|---|
| Symbol | glgB |
|---|
| ID | 6487620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 3719498 |
|---|
| End bp | 3721684 |
|---|
| Gene Length | 2187 bp |
|---|
| Protein Length | 728 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642743956 |
|---|
| Product | glycogen branching enzyme |
|---|
| Protein accession | YP_002047562 |
|---|
| Protein GI | 194451703 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.579586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGTC GTATCGATAG AGACGTGATT AATGCGCTAA TTGCAGGACA TTTTGCGGAC
CCTTTTTCCG TACTCGGAAT GCACCAGACC CAAGCCGGAC TAGAAGTCCG CGCCCTCTTA
CCTGACGCCA CCGACGTATG GGTGATTGAG CCCAAAACCG GACGTAAAGT CGGCAAACTG
GAATGTCTCG ACGCTCGCGG TTTTTTCTGC GGCGTTTTAC CCCGACGTAA AAATTTCTTT
CGCTATCAGC TCGCCGTGAC CTGGCACGGA CAGCAGAACC TCATCGACGA TCCTTACCGT
TTTGGTCCAT TAATACAGGA AATGGATGCC TGGCTATTGT CGGAAGGCAC CCACCTGCGT
CCTTATGAAA CGCTGGGCGC GCACGCCGAT ACGATGGATG GCGTCACCGG CACCCGTTTC
TCCGTCTGGG CGCCTAATGC TCGTCGCGTT TCGGTTGTCG GGCAATTCAA CTATTGGGAT
GGGCGTCGCC ACCCGATGCG TCTGCGCAAA GAGAGCGGTA TTTGGGAGCT GTTTATCCCC
GGCGCGCATA ATGGACAACT GTATAAATTC GAGCTGCTTG ATGCGAACGG TAATCTGCGC
ATTAAAGCCG ATCCCTATGC TTTTGAGGCG CAGATGCGTC CGGAAACGGC GTCGATGATT
TGCGGACTGC CGGAGAAAGT GACGCCAGGC GAAGAACGAC AAAAAGCCAA TCAGTTTGAT
GCGCCGATCT CGATTTATGA GGTGCATTTA GGTTCATGGC GCCGCCATAC GGATAACAAT
TTCTGGCTGA GCTATCGTGA GCTGGCGGAT CAGCTTGTGC CTTACGCCAA ATGGATGGGC
TTTACTCACC TTGAACTCTT GCCGGTCAAC GAACATCCGT TTGACGGCAG TTGGGGCTAC
CAGCCGACCG GCCTCTACGC GCCGACCCGC CGCTTTGGTA CGCGAGACGA CTTCCGTTAT
TTCATCAATG CGGCCCATGC GGCGGGCCTT AACGTCATTC TCGACTGGGT GCCGGGCCAT
TTCCCGTCCG ATGAATTTAG CCTCGCGGAG TTTGACGGCA CCCACCTCTA TGAGCACAGC
GACCCGCGCG AGGGCTATCA CCAGGACTGG AATACGCTGA TCTACAACTA TGGTCGTCGT
GAAGTCAGTA ATTATCTGGT GGGTAACGCC CTGTACTGGA TGGAGCGTTT TGGGATTGAT
GCGCTGCGTG TCGATGCGGT GGCCTCTATG ATCTACCGCG ACTACAGCCG CAAAGAGGGC
GAGTGGATAC CGAACGAGTT CGGCGGTCGT GAAAACCTGG AAGCCATTGA GTTTCTGCGT
AATACCAACC GCATTATTGG CGAGCAGGTG CCCGGCGCGG TCAGCATGGC GGAAGAGTCG
ACAGACTTCT CTGGCGTGAC GCGTCCACCG GAAACGGGTG GGCTGGGGTT CTGGTACAAG
TGGAATCTGG GCTGGATGCA CGACACGCTG GACTACATGA AGCTGGACCC GGTGTACCGC
CAGTATCATC ACGACAAGCT GACCTTTGGT ATGTTGTACA ACCATACCGA AAACTTTGTT
CTGCCGCTGT CGCACGATGA GGTGGTTCAC GGCAAGAAAT CCATTCTCGA TCGTATGCCG
GGCGATGCGT GGCAAAAATT CGCCAACCTG CGCGCCTATT ATGGTTGGAT GTGGGCCTTC
CCCGGCAAGA AACTGCTGTT TATGGGGAAT GAGTTTGCCC AGGGACGCGA GTGGAACCAT
GACGCCAGCC TCGACTGGCA CCTGCTGGAG GGGGGCGATA ACTGGCACCA CGGGGTTCAG
CGTCTGGTGC GCGATCTCAA CCACACCTAT CGCCACCATA AAGCGTTGCA TGAGCTGGAT
TTTGATGCTT ACGGCTTTGA GTGGCTGGTG GTCGATGACA ATGAACGCTC GGTACTGATT
TTTGTACGCC GTGATAAAGC CGGTAACGAG ATCATCGTCG CCAGCAACTT TACGCCCGTT
CCTCGCCACG ACTACCGCTT TGGCATCAAC CAGCCGGGAC GCTGGCGTGA AATTCTCAAT
ACTGATTCGA TGCATTATCA CGGTAGCAAC ACCGGCAATG GCGGCGTGGT GCACAGCGAT
GAGATCGAAA GCCATGGCCG TCAGCACTCT CTTAACCTGA CGTTACCGCC GTTGGCGACG
ATCTGGCTGA TGCGGGAGGG GGAATGA
|
|---|
| Protein sequence | MSSRIDRDVI NALIAGHFAD PFSVLGMHQT QAGLEVRALL PDATDVWVIE PKTGRKVGKL
ECLDARGFFC GVLPRRKNFF RYQLAVTWHG QQNLIDDPYR FGPLIQEMDA WLLSEGTHLR
PYETLGAHAD TMDGVTGTRF SVWAPNARRV SVVGQFNYWD GRRHPMRLRK ESGIWELFIP
GAHNGQLYKF ELLDANGNLR IKADPYAFEA QMRPETASMI CGLPEKVTPG EERQKANQFD
APISIYEVHL GSWRRHTDNN FWLSYRELAD QLVPYAKWMG FTHLELLPVN EHPFDGSWGY
QPTGLYAPTR RFGTRDDFRY FINAAHAAGL NVILDWVPGH FPSDEFSLAE FDGTHLYEHS
DPREGYHQDW NTLIYNYGRR EVSNYLVGNA LYWMERFGID ALRVDAVASM IYRDYSRKEG
EWIPNEFGGR ENLEAIEFLR NTNRIIGEQV PGAVSMAEES TDFSGVTRPP ETGGLGFWYK
WNLGWMHDTL DYMKLDPVYR QYHHDKLTFG MLYNHTENFV LPLSHDEVVH GKKSILDRMP
GDAWQKFANL RAYYGWMWAF PGKKLLFMGN EFAQGREWNH DASLDWHLLE GGDNWHHGVQ
RLVRDLNHTY RHHKALHELD FDAYGFEWLV VDDNERSVLI FVRRDKAGNE IIVASNFTPV
PRHDYRFGIN QPGRWREILN TDSMHYHGSN TGNGGVVHSD EIESHGRQHS LNLTLPPLAT
IWLMREGE
|
|---|
| |