| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3789 |
|---|
| Symbol | rpe |
|---|
| ID | 6491614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 3651554 |
|---|
| End bp | 3652231 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642743901 |
|---|
| Product | ribulose-phosphate 3-epimerase |
|---|
| Protein accession | YP_002047507 |
|---|
| Protein GI | 194450559 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
|---|
| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.475261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 84 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGT ATTTGATTGC CCCCTCAATT CTGTCGGCTG ATTTTGCTCG CCTGGGTGAA
GACACCGCCA AAGCGCTGGC TGCTGGTGCT GATGTTGTAC ACTTTGACGT CATGGATAAT
CACTATGTGC CGAACCTGAC TATCGGCCCG ATGGTGCTGA AATCCCTGCG TCAGTACGGT
ATTACCGCGC CTATTGATGT CCACCTGATG GTCAAGCCAG TCGACCGTAT CGTGCCCGAC
TTTGCCGCCG CTGGCGCGAG CATCATTACC TTTCACCCGG AAGCCTCCGA ACATGTTGAC
CGCACGCTAC AGCTGATTAA AGAACACGGC TGTAAAGCGG GGCTGGTATT CAACCCGGCA
ACGTCGCTCA GTTATCTCGA TTACGTCATG GACAAACTGG ATGTGATCCT GCTGATGTCC
GTGAACCCAG GCTTCGGCGG CCAGTCTTTT ATTCCGCAGA CGCTGGATAA ACTGCGCGAA
GTGCGTCGCC GCATTGATGC CTCCGGTTAC GACATTCGCC TGGAAGTGGA CGGCGGCGTG
AAGGTGAACA ATATCGGCGA GATCGCCGCA GCAGGTGCGG ACATGTTTGT TGCGGGGTCG
GCAATTTTCG ATAAACCCGA CTACAAAAAA GTGATTGATG AAATGCGCAG TGAGCTGGCA
AAGGTAACTC ATGGATAA
|
|---|
| Protein sequence | MKQYLIAPSI LSADFARLGE DTAKALAAGA DVVHFDVMDN HYVPNLTIGP MVLKSLRQYG
ITAPIDVHLM VKPVDRIVPD FAAAGASIIT FHPEASEHVD RTLQLIKEHG CKAGLVFNPA
TSLSYLDYVM DKLDVILLMS VNPGFGGQSF IPQTLDKLRE VRRRIDASGY DIRLEVDGGV
KVNNIGEIAA AGADMFVAGS AIFDKPDYKK VIDEMRSELA KVTHG
|
|---|
| |