Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3777 |
Symbol | ppiA |
ID | 6491579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3635516 |
End bp | 3636088 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642743889 |
Product | peptidyl-prolyl cis-trans isomerase A (rotamase A) |
Protein accession | YP_002047495 |
Protein GI | 194451368 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 0.796351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAAT CGACTCTGGC GGCTGTCGCA GCTGTTTTCG CTCTTTCTGC TCTTTCTCCC GTAGCGTTGG CAGCAAAAGG TGATCCTCAT GTGCTGTTAA CCACCTCCGC CGGGAATATT GAGCTGGAGC TGAACAGCCA GAAAGCGCCG ATTTCTGTGA AAAACTTTGT CGATTACGTC AACAGTGGTT TCTATAACAA CACTACGTTT CACCGAGTTA TTCCTGGCTT TATGATTCAG GGCGGTGGTT TTAACGAGCA GATGCAGCAG AAGAAACCGA ATCCGCCGAT TAAGAATGAA GCCGACAACG GTCTGCGTAA TACTCGCGGC ACGATCGCGA TGGCGCGCAC CGCAGATAAA GACAGCGCCA CCAGCCAGTT CTTTATTAAC GTCGCGGATA ACGCTTTTCT CGACCACGGC CAGCGCGACT TTGGCTATGC GGTATTTGGT AAAGTGGTAA AAGGTATGGA TGTCGCCGAT AAAATCTCGC AGGTACCGAC GCACGATGTC GGGCCTTATC AGAATGTGCC GACAAAACCA GTCGTTATCC TTTCCGCGAA AGTCCTGCCA TAA
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Protein sequence | MLKSTLAAVA AVFALSALSP VALAAKGDPH VLLTTSAGNI ELELNSQKAP ISVKNFVDYV NSGFYNNTTF HRVIPGFMIQ GGGFNEQMQQ KKPNPPIKNE ADNGLRNTRG TIAMARTADK DSATSQFFIN VADNAFLDHG QRDFGYAVFG KVVKGMDVAD KISQVPTHDV GPYQNVPTKP VVILSAKVLP
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