Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3744 |
Symbol | rplC |
ID | 6490587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3609852 |
End bp | 3610481 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642743857 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_002047463 |
Protein GI | 194447875 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00311101 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.0177476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGGTT TAGTCGGTAA AAAAGTGGGT ATGACCCGCA TCTTCACTGA AGATGGCGTC TCTATCCCAG TAACCGTAAT CGAAGTTGAA GCAAACCGTG TTACTCAGGT TAAAGACCTG GCTAACGATG GCTACCGCGC TGTTCAGGTT ACTACGGGTG CTAAAAAAGC TAACCGTGTC ACCAAGCCGG AAGCGGGTCA CTTTGCTAAA GCTGGCGTAG AAGCTGGCCG TGGTCTGTGG GAATTCCGTC TGGCTGAAGG CGAAGAATAC ACCGTAGGTC AGAGCATCAG CGTTGAACTG TTTGCTGACG TTAAAAAAGT TGACGTAACC GGTACCTCTA AAGGTAAAGG TTTCGCTGGT ACCGTTAAGC GCTGGAACTT CCGTACCCAG GACGCTACTC ACGGTAACTC CTTGTCTCAC CGCGTTCCGG GTTCTATCGG TCAGAACCAG ACTCCGGGCA AAGTGTTCAA AGGCAAGAAA ATGGCAGGTC AGATGGGTAA TGAGCGCGTA ACCGTTCAGA GCCTTGACGT AGTACGCGTT GACGCTGAGC GCAACCTGCT GCTGGTTAAG GGTGGTGTTC CGGGTGCAAC CGGTTGCGAC CTGATCGTTA AACCAGCTGT GAAGGCGTAA
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Protein sequence | MIGLVGKKVG MTRIFTEDGV SIPVTVIEVE ANRVTQVKDL ANDGYRAVQV TTGAKKANRV TKPEAGHFAK AGVEAGRGLW EFRLAEGEEY TVGQSISVEL FADVKKVDVT GTSKGKGFAG TVKRWNFRTQ DATHGNSLSH RVPGSIGQNQ TPGKVFKGKK MAGQMGNERV TVQSLDVVRV DAERNLLLVK GGVPGATGCD LIVKPAVKA
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