Gene SeHA_C3705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3705 
SymbolaroE 
ID6487697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3587561 
End bp3588379 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content51% 
IMG OID642743820 
Productshikimate 5-dehydrogenase 
Protein accessionYP_002047426 
Protein GI194449145 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000798071 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.028022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCT ATGCTGTTTT TGGAAATCCG ATTGCGCACA GCAAATCGCC ATTTATTCAT 
CAGCAATTTG CTCAGCAGCT AGATATTGTT CACCCCTATG GTCGCGTGCT GGCCCCTATT
AATAATTTCA TTAATACGCT TGATGCCTTT TTCGCGGCAG GGGGAAAAGG CGCAAACATC
ACAGTACCTT TTAAAGAGGA GGCGTTTGCG CGATCGGATG AGTTAACGGA ACGAGCATCG
CTGGCGGGAG CAGTCAATAC ATTAAAGCGG CTGGAAGATG GTCGTTTGCT TGGCGACAAT
ACTGACGGTA TCGGTTTATT AAGCGATCTC AAACGTTTAA ATTTTATCCG CCCAGGATTG
CGTATTTTGC TGATTGGCGC GGGCGGCGCA TCCCGGGGCG TGCTGTTACC CCTGCTTTCT
TTGGATTGCG CGGTCACTAT CACTAACCGT ACAGCTTCAC GTGCCGAAGC GTTGGCGAAA
ATCTTCGCTC ATACCGGCAG CGTTCATGCC ACGGATATGG ACAAGCTGGA TGGTTGTGAG
TTTGACCTGA TTATTAATGC GACCTCCAGC GGCATACGGG GCGAAATCCC GGCGATTCCG
GCGTCACTTA TTCACCCTTC CCTCTGTTGC TATGACATGT TCTATCAAAA AGGGAATACG
CCATTTCTCT CCTGGTGTGT ACAACAGGGC GCAAAACGCT ACGCAGATGG GCTGGGAATG
CTGGTGGGGC AGGCTGCACA TGCCGTTTTG CTTTGGCACG GTGTATTACC GCAGGTCGAG
CCAGTGATTG AGCTGCTACA GCAGGAATTA TTAGCGTGA
 
Protein sequence
METYAVFGNP IAHSKSPFIH QQFAQQLDIV HPYGRVLAPI NNFINTLDAF FAAGGKGANI 
TVPFKEEAFA RSDELTERAS LAGAVNTLKR LEDGRLLGDN TDGIGLLSDL KRLNFIRPGL
RILLIGAGGA SRGVLLPLLS LDCAVTITNR TASRAEALAK IFAHTGSVHA TDMDKLDGCE
FDLIINATSS GIRGEIPAIP ASLIHPSLCC YDMFYQKGNT PFLSWCVQQG AKRYADGLGM
LVGQAAHAVL LWHGVLPQVE PVIELLQQEL LA