Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C3705 |
Symbol | aroE |
ID | 6487697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 3587561 |
End bp | 3588379 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642743820 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_002047426 |
Protein GI | 194449145 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000798071 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 0.028022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCT ATGCTGTTTT TGGAAATCCG ATTGCGCACA GCAAATCGCC ATTTATTCAT CAGCAATTTG CTCAGCAGCT AGATATTGTT CACCCCTATG GTCGCGTGCT GGCCCCTATT AATAATTTCA TTAATACGCT TGATGCCTTT TTCGCGGCAG GGGGAAAAGG CGCAAACATC ACAGTACCTT TTAAAGAGGA GGCGTTTGCG CGATCGGATG AGTTAACGGA ACGAGCATCG CTGGCGGGAG CAGTCAATAC ATTAAAGCGG CTGGAAGATG GTCGTTTGCT TGGCGACAAT ACTGACGGTA TCGGTTTATT AAGCGATCTC AAACGTTTAA ATTTTATCCG CCCAGGATTG CGTATTTTGC TGATTGGCGC GGGCGGCGCA TCCCGGGGCG TGCTGTTACC CCTGCTTTCT TTGGATTGCG CGGTCACTAT CACTAACCGT ACAGCTTCAC GTGCCGAAGC GTTGGCGAAA ATCTTCGCTC ATACCGGCAG CGTTCATGCC ACGGATATGG ACAAGCTGGA TGGTTGTGAG TTTGACCTGA TTATTAATGC GACCTCCAGC GGCATACGGG GCGAAATCCC GGCGATTCCG GCGTCACTTA TTCACCCTTC CCTCTGTTGC TATGACATGT TCTATCAAAA AGGGAATACG CCATTTCTCT CCTGGTGTGT ACAACAGGGC GCAAAACGCT ACGCAGATGG GCTGGGAATG CTGGTGGGGC AGGCTGCACA TGCCGTTTTG CTTTGGCACG GTGTATTACC GCAGGTCGAG CCAGTGATTG AGCTGCTACA GCAGGAATTA TTAGCGTGA
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Protein sequence | METYAVFGNP IAHSKSPFIH QQFAQQLDIV HPYGRVLAPI NNFINTLDAF FAAGGKGANI TVPFKEEAFA RSDELTERAS LAGAVNTLKR LEDGRLLGDN TDGIGLLSDL KRLNFIRPGL RILLIGAGGA SRGVLLPLLS LDCAVTITNR TASRAEALAK IFAHTGSVHA TDMDKLDGCE FDLIINATSS GIRGEIPAIP ASLIHPSLCC YDMFYQKGNT PFLSWCVQQG AKRYADGLGM LVGQAAHAVL LWHGVLPQVE PVIELLQQEL LA
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