| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3582 |
|---|
| Symbol | nusA |
|---|
| ID | 6489989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 3471627 |
|---|
| End bp | 3473129 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642743702 |
|---|
| Product | transcription elongation factor NusA |
|---|
| Protein accession | YP_002047316 |
|---|
| Protein GI | 194450306 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 90 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAG AAATTTTGGC TGTTGTTGAA GCCGTCTCCA ACGAAAAAGC GCTGCCACGC
GAAAAAATTT TTGAAGCGCT GGAAAGTGCG CTGGCGACAG CAACAAAGAA AAAATATGAG
CAGGAGATCG ATGTTCGTGT AGAAATCGAT CGTAAAAGCG GTGATTTTGA TACTTTCCGC
CGTTGGTTGA TCGTTGAAGA AGTGACCATG CCGACGAAGG AAATTACGCT GGAAGCGGCG
CGTTTTGAAG ACGAAAGCCT GAATGTCGGC GACTATGTTG AAGATCAGAT TGAATCTGTC
ACCTTTGACC GTATCACCAC GCAGACTGCG AAACAGGTTA TCGTACAGAA GGTCCGTGAA
GCTGAACGCG CGATGGTTGT CGATCAGTTC CGCGACCAGG AAGGCGAAAT TGTCACTGGC
GTGGTGAAGA AAGTGAACCG CGACAATATC TCTCTGGAAA TTAAATCCGA AGGGATGGCC
GGTAACGCTG AAGCGGTGAT TCTGCGTGAA GATATGCTGC CGCGTGAAAA CTTCCGTCCG
GGCGACCGCA TCCGCGGTGT TCTGTACGCT GTACGTCCAG AAGCGCGTGG CGCGCAGCTG
TTCGTCACCC GTTCCAAGCC GGAAATGCTG ATCGAACTGT TCCGCATCGA AGTGCCGGAA
ATCGGCGAAG AAGTGATTGA AATTAAAGCG GCGGCTCGCG ATCCGGGTTC TCGTGCGAAA
ATCGCAGTGA AAACCAACGA TAAACGTATC GATCCGGTCG GCGCTTGCGT GGGGATGCGC
GGCGCGCGCG TTCAGGCGGT CTCTACCGAA CTGGGCGGTG AGCGTATCGA TATCGTGCTG
TGGGATGATA ACCCGGCGCA GTTCGTCATT AATGCGATGG CGCCGGCAGA CGTCGCGTCT
ATCGTGGTGG ACGAAGATAA ACATACCATG GATATCGCCG TTGAAGCCGG TAATCTGGCG
CAGGCGATCG GACGTAATGG TCAGAACGTC CGCCTGGCTT CGCAATTGAG CGGCTGGGAA
CTCAACGTAA TGACCGTTGA TGACTTGCAG GCTAAACATC AGGCTGAAGC ACATGCCGCT
ATCGAGATCT TTACTAAATA TCTTGATATT GATGAAGAGT TCGCGACCGT TCTGGTAGAA
GAAGGTTTCT CCACGCTCGA AGAACTGGCC TATGTGCCAA TGAAAGAACT GCTGGAAATT
GACGGCCTTG ATGAGCCGAC CGTTGAAGCA CTGCGCGAGC GTGCTAAAAA CGCACTGGCC
ACTCTGGCGC AGGACCAGGA AGCAAGCCTC GGTGATAACA AACCGGCTGA CGATCTGCTG
AATCTGGAAG GATTAGATCG CGATATGGCT TTCAAACTGG CGGCTCGTGG TGTTTGTACG
CTGGAAGATC TCGCCGACCA GGGCATTGAT GATCTGGCTG ATATCGAAGG GTTGACCGAC
GAAAAAGCCG GTGAGCTGAT TATGGCTGCC CGTAATATTT GCTGGTTCGG CGACGAAGCG
TAA
|
|---|
| Protein sequence | MNKEILAVVE AVSNEKALPR EKIFEALESA LATATKKKYE QEIDVRVEID RKSGDFDTFR
RWLIVEEVTM PTKEITLEAA RFEDESLNVG DYVEDQIESV TFDRITTQTA KQVIVQKVRE
AERAMVVDQF RDQEGEIVTG VVKKVNRDNI SLEIKSEGMA GNAEAVILRE DMLPRENFRP
GDRIRGVLYA VRPEARGAQL FVTRSKPEML IELFRIEVPE IGEEVIEIKA AARDPGSRAK
IAVKTNDKRI DPVGACVGMR GARVQAVSTE LGGERIDIVL WDDNPAQFVI NAMAPADVAS
IVVDEDKHTM DIAVEAGNLA QAIGRNGQNV RLASQLSGWE LNVMTVDDLQ AKHQAEAHAA
IEIFTKYLDI DEEFATVLVE EGFSTLEELA YVPMKELLEI DGLDEPTVEA LRERAKNALA
TLAQDQEASL GDNKPADDLL NLEGLDRDMA FKLAARGVCT LEDLADQGID DLADIEGLTD
EKAGELIMAA RNICWFGDEA
|
|---|
| |