Gene SeHA_C3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3530 
Symbol 
ID6488229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3422370 
End bp3423266 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content57% 
IMG OID642743658 
ProductLysR family transcriptional regulator 
Protein accessionYP_002047272 
Protein GI194448915 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.24524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.157223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAG AGAGAGCGCT GACGCTTGAA GCATTGCGTG TGATGGACGC CATTGACCGC 
CGGGGCAGTT TTGCCGCAGC GGCTGATGAG TTGGGGCGTG TGCCCTCCGC GCTGAGTTAC
ACCATGCAGA AGCTGGAAGA AGAGTTGGAC GTTGTACTGT TCGATCGCTC CGGCCATCGT
ACAAAATTCA CCAACGTCGG ACGTATGCTG CTGGAACGCG GGCGGGTATT GCTGGAAGCG
GCAGACAAGT TAACGACGGA TGCTGAAGCG TTGGCCCGCG GTTGGGAAAC GCATCTGACG
CTAGTCACTG AAGCTCTGGT ACCGACGCCT GCTTTTTTTC CACTGATCGA CCGGCTGGCC
GCTAAAGCCA ATACGCAGCT TTCATTGATT ACCGAAGTAC TGGCTGGCGC ATGGGAGCGG
CTTGAGCAGG GACGGGCGGA TATCGTTATC GCTCCGGATA TGCATTTTCG ATCGTCGTCG
GAAATTAACT CCCGTAAGTT GTATACGTTA ATGAATGTGT ATGTCGCCGC GCCTGACCAC
CCTATTCATC AGGAGCCGGA GCCGCTTTCG GAAGTGACGC GGGTTAAATA CCGCGGCGTA
GCGGTAGCGG ATACCGCGCG CGAGCGGCCG GTATTAACGG TGCAACTGCT GGATAAGCAG
CCACGTCTGA CGGTAAGCAC GATTGAAGAT AAACGTCAGG CGCTGCTGGC CGGGCTTGGC
GTCGCGACCA TGCCATATTC GATGGTGGAA CAGGATATTG CCGAAGGGCG GCTACGCGTG
GTCAGCCCGG AATCGACCAG CGAAATCGAT ATTATTATGG CCTGGCGGCG CGACAGTATG
GGGGAGGCAA AAGCCTGGTG CCTGCGGGAA ATACCTAAGC TATTCGCCGG AAAATAA
 
Protein sequence
MAKERALTLE ALRVMDAIDR RGSFAAAADE LGRVPSALSY TMQKLEEELD VVLFDRSGHR 
TKFTNVGRML LERGRVLLEA ADKLTTDAEA LARGWETHLT LVTEALVPTP AFFPLIDRLA
AKANTQLSLI TEVLAGAWER LEQGRADIVI APDMHFRSSS EINSRKLYTL MNVYVAAPDH
PIHQEPEPLS EVTRVKYRGV AVADTARERP VLTVQLLDKQ PRLTVSTIED KRQALLAGLG
VATMPYSMVE QDIAEGRLRV VSPESTSEID IIMAWRRDSM GEAKAWCLRE IPKLFAGK