| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3325 |
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| Symbol | speA |
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| ID | 6491842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | - |
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| Start bp | 3241290 |
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| End bp | 3243188 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642743458 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_002047074 |
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| Protein GI | 194450533 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.591958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 0.70504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCCC AGGAAGCCAG CAAGATGCTG CGCACTTACA ATATTGCCTG GTGGGGCAAT
AACTACTACG ACGTCAACGA GCTGGGCCAT ATTAGCGTAT GCCCCGATCC CGACGTACCG
GAAGCGCGTG TCGATCTTGC CAAACTGGTG AAAGCGCGCG AAGCGCAAGG TCAGCGTCTG
CCGGCGCTGT TCTGCTTCCC ACAGATCCTG CAACACCGTT TGCGTTCAAT TAACGCGGCG
TTTAAGCGTG CGCGTGAATC TTACGGTTAT AACGGCGACT ACTTCCTCGT TTACCCGATT
AAGGTCAATC AGCATCGCCG CGTGATCGAG TCCCTTATCC ATTCCGGTGA ACCGTTGGGG
CTGGAAGCGG GGTCAAAAGC GGAATTGATG GCGGTGCTGG CGCATGCCGG CATGACCCGT
AGCGTGATCG TCTGTAATGG TTATAAAGAC CGTGAATACA TTCGGCTGGC GTTGATTGGC
GAGAAGATGG GCCATAAGGT TTATCTGGTC ATCGAAAAGA TGTCTGAAAT CGCGATTGTG
CTGGAAGAGG CCGAGCGCCT GAACGTGGTT CCTCGCCTGG GCGTGCGTGC GCGTCTGGCC
TCTCAGGGGT CCGGTAAGTG GCAATCCTCC GGCGGCGAAA AATCAAAATT CGGCCTGGCG
GCGACCCAGG TGCTGCAACT GGTGGAGACC CTGCGTGACG CCGGGCGTCT GGACAGTCTG
CAACTGTTGC ACTTCCACCT GGGATCGCAG ATGGCGAACA TTCGCGATAT CGCGACCGGC
GTGCGCGAGT CCGCGCGTTT CTATGTTGAG CTGCATAAGC TGGGCGTTAA TATCCAGTGC
TTCGACGTGG GCGGCGGTCT GGGCGTGGAT TATGAAGGTA CCCGCTCGCA GTCCGACTGT
TCGGTGAACT ATGGCTTGAA CGAATATGCC AATAACATCA TCTGGGCGAT TGGCGATGCC
TGCGAAGAGC ATGGTTTACC GCATCCGACG GTGATTACCG AGTCTGGCCG CGCCGTCACT
GCGCACCATA CGGTACTGGT CTCTAACATT ATCGGCGTGG AGCGTAACGA ATACACGGAT
CCGACTGCCC CTGCTGAAGA TGCGCCGCGC GCGCTGCAAA ATCTGTGGGA AACCTGGCAG
GAGATGCATA AGCCTGGCAC CCGCCGCTCG CTGCGTGAAT GGCTGCATGA TAGCCAAATG
GATCTGCACG ATATTCATAT CGGCTACTCT TCCGGCGCGT TTAGTTTGCA GGAGCGCGCC
TGGGCGGAGC AACTTTATCT CAGCATGTGC CATGAAGTGC AGAAGCAACT GGACCCGCAA
AACCGTGCGC ATCGTCCGAT TATCGACGAA CTGCAAGAGC GGATGGCGGA CAAAATGTAC
GTCAACTTCT CGCTGTTCCA GTCAATGCCG GACGCGTGGG GAATCGATCA GCTCTTCCCG
GTGTTGCCGC TGGAAGGGTT AGATCAGGTA CCGGAACGTC GTGCCGTGCT ATTGGATATA
ACCTGTGATT CCGATGGCGC TATCGACCAC TATATCGATG GCGACGGTAT CGCCACGACG
ATGCCGATGC CGGAATACGA TCCAGAGAAT CCGCCGATGC TCGGCTTCTT TATGGTCGGC
GCCTATCAGG AGATCCTCGG TAACATGCAC AACCTGTTTG GCGATACTGA AGCGGTTGAC
GTGTTTGTCT TCCCGGATGG TAGCGTCGAG GTTGAGCTGT CGGACGAAGG CGATACCGTT
GCGGATATGC TGCAATATGT GCAACTGGAT CCGAAAACGC TGTTAACGCA TTTCCGCGAC
CAGGTAAAAC AGACGGATCT GGACGATGCG TTGCAGCAGC AGTTCCTTGA GGAATTTGAA
GCGGGACTGT ACGGTTATAC TTATCTTGAA GATGAGTAA
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| Protein sequence | MSSQEASKML RTYNIAWWGN NYYDVNELGH ISVCPDPDVP EARVDLAKLV KAREAQGQRL
PALFCFPQIL QHRLRSINAA FKRARESYGY NGDYFLVYPI KVNQHRRVIE SLIHSGEPLG
LEAGSKAELM AVLAHAGMTR SVIVCNGYKD REYIRLALIG EKMGHKVYLV IEKMSEIAIV
LEEAERLNVV PRLGVRARLA SQGSGKWQSS GGEKSKFGLA ATQVLQLVET LRDAGRLDSL
QLLHFHLGSQ MANIRDIATG VRESARFYVE LHKLGVNIQC FDVGGGLGVD YEGTRSQSDC
SVNYGLNEYA NNIIWAIGDA CEEHGLPHPT VITESGRAVT AHHTVLVSNI IGVERNEYTD
PTAPAEDAPR ALQNLWETWQ EMHKPGTRRS LREWLHDSQM DLHDIHIGYS SGAFSLQERA
WAEQLYLSMC HEVQKQLDPQ NRAHRPIIDE LQERMADKMY VNFSLFQSMP DAWGIDQLFP
VLPLEGLDQV PERRAVLLDI TCDSDGAIDH YIDGDGIATT MPMPEYDPEN PPMLGFFMVG
AYQEILGNMH NLFGDTEAVD VFVFPDGSVE VELSDEGDTV ADMLQYVQLD PKTLLTHFRD
QVKQTDLDDA LQQQFLEEFE AGLYGYTYLE DE
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