Gene SeHA_C3255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3255 
Symbol 
ID6490584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3179018 
End bp3180271 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content49% 
IMG OID642743393 
ProductPTS system galactitol-specific IIC component 
Protein accessionYP_002047010 
Protein GI194449044 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3775] Phosphotransferase system, galactitol-specific IIC component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0413472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGT TAAAAAGCAT CATGTTTACT ATTACAAGCA TGGGCGCTAC AGCAATATTG 
CCGCTTGTTA TTTTCCTTTT AGGTCTGGTT TTTCGAATGA AAGTGGGTGC CGCTATTAAA
TCTGGCATCA CTGTAGGTAT CGGTTTCATC GGTCTGGGAC TGGTTGTTGG GCTGCTAAAC
ACAGCCCTGC AGCCAGCAAT TACGTATTAC TCAAAAATTG GCAGCGGGTT CACCGTGGCT
GATATTGGAT GGCCTGCCGT TGGCGCAGCT GCGTGGGTTG CCCCGTTTGC CGCAATGGTT
ATTCCTATTG GCATTATCCT GAACCTGATC CTGGTTCGTC TGAAGCTTAC CAAAACTCTT
AATGTGGACA TCTGGAACTA CATGCATTTC CTGGTTCCGG GGGCTCTTGC GTATTTCGTC
TTTGACAGCT TTTTCCTTGG GTTGGGTGTC GCCGTGGCTC TGAGCGTAGC CGCACTGTTT
ATTGGCGATC TTATTGCGCC AAGATGGCAG AAATACTACG GCCTCGAGGG GACGACCTGT
ACCACGATGA TCCACATCGG ATGGACACTT CCATTTGCAT GGGTTGTTAA CAAAATTATC
GATTTCATTC CGGGTTTAAA CAAGCTGGAT GTGGATTTAG AGAGCGTTCA GAAACGACTG
GGTGTATTCG GTGAACCCGC AATCATCGGC GTGATTGTCG GTTGTCTCCT GGGATTGTTA
ACCAAACAAC CCATTACAAC CATCGTGCCA ATGGCGATGG GCGTGGCTGG CGTCATGGTG
CTGTTGCCAA AAGTGGTTGG GGTCCTTATG GAAGGGCTTA ACCCGATAGG TAAGAGTGCT
AAAGAAATCA TGCAAAAGCA GATGGGTAAA GATGCGGAGC TGAATATCGG GATGGACTGT
GCCCTTGCGC TTGGCGACCC AGCAACGGTT ACTGTCACCG TTATTACCAT CCCTCTGACA
ATGCTTTGTG CGCTGGTTTT ACCGGGTATT CAGATATTCC CAATCGGCGT GCTGATGTCA
ATTATCTACA TGACGACCAT GACAGTCATG GTCAGTAACG GCAACGTTAT TCGCTCGATT
ATCTCAACCT TACTGTTCTG TGTAGTGGTT ATGTATCTGG GGGGGTATGT CGCGCCCGGT
GCAACTGAGT TCCTGAACGG TGCTGGCGTC GGCCTTAATG GCCAGGGCAC GGACTTCGTA
TTAACCGGCC CATGGGAGAT TCTGACCTAC TGGTTGAGCA CAGTTACGCA TTAA
 
Protein sequence
MEMLKSIMFT ITSMGATAIL PLVIFLLGLV FRMKVGAAIK SGITVGIGFI GLGLVVGLLN 
TALQPAITYY SKIGSGFTVA DIGWPAVGAA AWVAPFAAMV IPIGIILNLI LVRLKLTKTL
NVDIWNYMHF LVPGALAYFV FDSFFLGLGV AVALSVAALF IGDLIAPRWQ KYYGLEGTTC
TTMIHIGWTL PFAWVVNKII DFIPGLNKLD VDLESVQKRL GVFGEPAIIG VIVGCLLGLL
TKQPITTIVP MAMGVAGVMV LLPKVVGVLM EGLNPIGKSA KEIMQKQMGK DAELNIGMDC
ALALGDPATV TVTVITIPLT MLCALVLPGI QIFPIGVLMS IIYMTTMTVM VSNGNVIRSI
ISTLLFCVVV MYLGGYVAPG ATEFLNGAGV GLNGQGTDFV LTGPWEILTY WLSTVTH