Gene SeHA_C3144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3144 
SymbolqueD 
ID6488401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp3067790 
End bp3068152 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content53% 
IMG OID642743288 
Productqueuosine biosynthesis protein QueD 
Protein accessionYP_002046907 
Protein GI194449237 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.921331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.300292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA CGTTGTATAA AGATTTCACC TTTGAAGCCG CTCACCGCCT GCCTCACGTG 
CCTGAAGGGC ATAAGTGCGG CCGCCTGCAC GGACACTCGT TTATGGTGCG TCTCGAAATT
ACCGGTGAAG TCGATCCGCA TACCGGTTGG ATTATGGATT TCGCGGATCT CAAAGCGGCG
TTTAAACCGA CTTACGATCG TCTTGATCAC TACTATCTGA ATGATATTCC AGGGCTGTCC
AATCCCACCA GCGAAGTGCT GGCAAAATGG ATTTGGGATC AGGTTAAGCC CGTCGTGCCG
CTACTGAGCG CCGTGATGGT GAAAGAGACC TGTACAGCCG GCTGCGTCTA TCGCGGGGAA
TAA
 
Protein sequence
MSTTLYKDFT FEAAHRLPHV PEGHKCGRLH GHSFMVRLEI TGEVDPHTGW IMDFADLKAA 
FKPTYDRLDH YYLNDIPGLS NPTSEVLAKW IWDQVKPVVP LLSAVMVKET CTAGCVYRGE