| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C3043 |
|---|
| Symbol | hypA |
|---|
| ID | 6491782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 2974309 |
|---|
| End bp | 2974665 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642743198 |
|---|
| Product | hydrogenase nickel incorporation protein |
|---|
| Protein accession | YP_002046817 |
|---|
| Protein GI | 194448636 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
|---|
| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.00478304 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACGAAA TCACCCTCTG CCAACGGGCA CTGGAATTGA TTGAACAACA GGCTTCAGCA
TACGGTGCAA AACGTGTGAC AGCCGTCTGG ATCAAAATTG GCGCATTTTC TTGCGTGGAA
ACCAGCGCTC TTTCCTTTTG TTTTGATCTG GTATGCCGCG GCACGATAGC AGAAGGTTGT
AAACTGCACC TCGAAGAACA GGAAGCCGAA TGCTGGTGTG AGCATTGTCA ACAATATGTC
ACGTTGTTAA CCCACCGTGT ACGTCGTTGT CCGCAATGTC ATAGCGATAC GCTGCGAATT
GTGGCCGATG ACGGCTTACA AATTCGGCGC ATAGAGATTG ATGAAACTGA AGATTAA
|
|---|
| Protein sequence | MHEITLCQRA LELIEQQASA YGAKRVTAVW IKIGAFSCVE TSALSFCFDL VCRGTIAEGC
KLHLEEQEAE CWCEHCQQYV TLLTHRVRRC PQCHSDTLRI VADDGLQIRR IEIDETED
|
|---|
| |