Gene SeHA_C3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C3013 
SymbolalaS 
ID6489447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2945881 
End bp2948511 
Gene Length2631 bp 
Protein Length876 aa 
Translation table11 
GC content55% 
IMG OID642743168 
Productalanyl-tRNA synthetase 
Protein accessionYP_002046787 
Protein GI194450006 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0013] Alanyl-tRNA synthetase 
TIGRFAM ID[TIGR00344] alanine--tRNA ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.627309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1.32365e-06 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCAAGA GCACCGCTGA GATCCGTCAG GCGTTTCTCG ACTTTTTCCA TAGTAAAGGG 
CATCAGGTAG TTGCCAGCAG TTCCCTGGTG CCTAACAATG ACCCCACTCT GTTGTTTACC
AATGCCGGGA TGAACCAGTT CAAGGATGTT TTCCTTGGGC TCGATAAACG TAATTATTCC
CGTGCAACCA CTTCCCAGCG TTGCGTACGC GCGGGGGGTA AACACAACGA TCTGGAAAAC
GTCGGATACA CTGCACGTCA CCATACTTTC TTCGAAATGC TGGGCAACTT CAGCTTCGGC
GATTACTTCA AACACGACGC CATTCAGTTC GCATGGGAAT TACTGACCGG TGAAAACTGG
TTTGCTCTGC CAAAAGAGCG TTTATGGGTC ACCGTCTATG AAACCGACGA CGAAGCCTAT
GAGATCTGGG AAAAAGAAGT CGGCATCCCG CGCGAGCGTA TTATCCGTAT TGGCGACAAT
AAAGGCGCGC CATACGCATC GGATAACTTC TGGCAGATGG GCGATACCGG TCCCTGCGGT
CCGTGCACCG AAATCTTCTA CGATCATGGC GACCACATCT GGGGCGGCCC TCCGGGAAGC
CCGGAAGAGG ACGGCGATCG CTATATTGAA ATCTGGAACA TCGTCTTTAT GCAGTTCAAC
CGTCAGGCTG ACGGGACGAT GGAACCATTG CCGAAACCGT CTGTAGATAC CGGTATGGGG
CTGGAGCGTA TTGCCGCGGT ACTGCAACAC GTTAACTCTA ACTATGACAT CGACCTGTTC
CGCACGTTGA TTGAAGCGGT AGCGAAAGTC ACCGGCGCCA CCGATTTGGG TAATAAATCG
CTGCGCGTTA TCGCCGACCA CATCCGTTCT TGCGCATTCC TGGTTGCCGA TGGCGTGCTG
CCGTCGAATG AAAACCGTGG CTATGTGCTG CGTCGCATTA TTCGTCGCGC GGTTCGTCAC
GGCAACATGC TGGGCGCGAA AGAGACCTTC TTCTACAAGC TGGTTGGGCC GCTGATTGAG
GTAATGGGCT CCGCAGGCGA AGAGTTGAAA CGTCAGCAGG CGCAGGTCGA ACAGGTTCTG
AAAACGGAAG AAGAGCAGTT CGCCCGTACG CTGGAGCGCG GTCTGGCGCT GCTGGATGAA
GAACTGGCGA AATTGCAGGG CGACACCCTG GACGGCGAAA CCGCTTTCCG TCTGTATGAT
ACTTATGGTT TCCCGGTCGA TCTAACGGCG GACGTCTGCC GTGAGCGCAA CATCAAAGTC
GATGAAGCCG GTTTTGAAGC CGCTATGGAA GAGCAACGCC GTCGCGCGCG CGAAGCTAGC
GGTTTTGGCG CGGACTACAA CGCGATGATC CGCGTTGATA GCGCTTCTGA ATTTAAAGGT
TATGACCATC TGGAACTGAA CGGCAAAGTG ACTGCGCTGT TTGTCGATGG TAAAGCGGTT
GAAGCGATTA ACGCGGGACA GGAAGCTGTT GTCGTGCTGG ATCAGACCCC ATTCTATGCG
GAATCAGGCG GTCAGGTTGG CGATAAAGGC GAGCTGAAAG GCGCTGGATT TACTTTCGCT
GTGGACGACA CGCAAAAATA TGGTCAGGCG ATTGGTCACC TCGGCAAATT GTCTGCGGGC
GCTCTGAAAG TGGGCGATGC GGTACAGGCT GACGTAGATG AAGCGCGCCG CGCACGTATC
CGTCTGAACC ACTCCGCCAC GCACCTGATG CACGCGGCGT TGCGCCAGGT GCTTGGGACA
CACGTTGCGC AGAAAGGTTC GCTGGTTAGC GATAAAGTGC TGCGCTTCGA CTTCTCGCAC
AATGAAGCGA TGAAGCCGTC GGAGATTCGT GAGGTTGAAG ATTTGGTGAA TGCGCAAATT
CGCCGCAACC TGCCGATTGA AACGAACATC ATGGATCTCG ACGCGGCGAA GGCGAAAGGG
GCCATGGCGC TGTTTGGCGA GAAATACGAC GAACGTGTAC GCGTTCTGAG CATGGGCGAT
TTTTCTACCG AACTGTGCGG CGGTACTCAC GCCAGTCGTA CCGGTGATAT CGGTCTATTC
CGTATTATCT CTGAGTCCGG CACCGCAGCG GGCATTCGTC GTATTGAGGC GGTAACCGGT
GAAGGCGCTA TGGCCACCGT TCATGCGCAA AGCGATCGCT TAAACGATAT TGCGCATCTG
CTGAAGGGCG ACAGCCAGAA TCTGGGCGAC AAAGTGCGTG CCGTGCTGGA ACGTACACGT
CAGCTGGAAA AAGAGTTGCA GCAGTTGAAG GACCAGGCCG CAGCGCAGGA GAGTGCAAAT
CTTTCCAGTA AAGCGGTCGA TCTCAACGGC GTGAAGCTCC TGGTCAGCGA GCTTGCTGGT
ATTGAGCCGA AAATGCTGCG AACCATGGTT GATGATCTGA AAAATCAACT GGGGTCTACC
GTTATCGTAC TGGCAACGGT TGTTGAAGGT AAGGTTTCTC TGATTGCGGG CGTGTCGAAG
GATGTGACCG ACCGGGTTAA AGCAGGGGAA TTGATTGGGA TGGTCGCTCA GCAGGTGGGC
GGTAAGGGTG GCGGTCGTCC GGACATGGCG CAAGCCGGTG GTACGGATGC GGCAGCTCTG
CCTGCAGCGT TAGCCAGTGT ACAAGGCTGG GTCAGCGCAA AATTGCAATA A
 
Protein sequence
MSKSTAEIRQ AFLDFFHSKG HQVVASSSLV PNNDPTLLFT NAGMNQFKDV FLGLDKRNYS 
RATTSQRCVR AGGKHNDLEN VGYTARHHTF FEMLGNFSFG DYFKHDAIQF AWELLTGENW
FALPKERLWV TVYETDDEAY EIWEKEVGIP RERIIRIGDN KGAPYASDNF WQMGDTGPCG
PCTEIFYDHG DHIWGGPPGS PEEDGDRYIE IWNIVFMQFN RQADGTMEPL PKPSVDTGMG
LERIAAVLQH VNSNYDIDLF RTLIEAVAKV TGATDLGNKS LRVIADHIRS CAFLVADGVL
PSNENRGYVL RRIIRRAVRH GNMLGAKETF FYKLVGPLIE VMGSAGEELK RQQAQVEQVL
KTEEEQFART LERGLALLDE ELAKLQGDTL DGETAFRLYD TYGFPVDLTA DVCRERNIKV
DEAGFEAAME EQRRRAREAS GFGADYNAMI RVDSASEFKG YDHLELNGKV TALFVDGKAV
EAINAGQEAV VVLDQTPFYA ESGGQVGDKG ELKGAGFTFA VDDTQKYGQA IGHLGKLSAG
ALKVGDAVQA DVDEARRARI RLNHSATHLM HAALRQVLGT HVAQKGSLVS DKVLRFDFSH
NEAMKPSEIR EVEDLVNAQI RRNLPIETNI MDLDAAKAKG AMALFGEKYD ERVRVLSMGD
FSTELCGGTH ASRTGDIGLF RIISESGTAA GIRRIEAVTG EGAMATVHAQ SDRLNDIAHL
LKGDSQNLGD KVRAVLERTR QLEKELQQLK DQAAAQESAN LSSKAVDLNG VKLLVSELAG
IEPKMLRTMV DDLKNQLGST VIVLATVVEG KVSLIAGVSK DVTDRVKAGE LIGMVAQQVG
GKGGGRPDMA QAGGTDAAAL PAALASVQGW VSAKLQ