Gene SeHA_C2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2975 
Symbol 
ID6491266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2919662 
End bp2920111 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content44% 
IMG OID642743131 
ProductLysM domain/BON superfamily protein 
Protein accessionYP_002046755 
Protein GI194447579 
COG category[S] Function unknown 
COG ID[COG1652] Uncharacterized protein containing LysM domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.870465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value0.0673181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTTT TCAATTTTGT AAAAGATGCA GGTGAAAAAC TCTGGGACGC GGTAACCGCT 
AATCATGATA AGGACGATCA GGCGAAAAAA GTCCAGGAAC ATTTAAATAA AACGGGAATA
CCCGACGCTG ATAAAGTGAA TGTGCAAATT GCGGATGGAA AAGCGACAGT GACGGGGGAT
GGGCTGAGTC AGGAGGCAAA AGAAAAAATT CTGGTTGCCG TGGGGAATAT CGCCGGGATT
AGCAGCGTTG ACGATCAGGT TAAAACCACG ACGCCGGCGG CTGAAAGTCA GTTTTATACC
GTAAAATCAG GCGACACCCT GAGCGCTATT TCAAAGCAAG TGTATGGTAA CGCCAATCTG
TATAATAAAA TTTTCGAGGC AAATAAACCG ATGCTGAAAA GCCCGGAAAA AATATATCCG
GGACAAGTGT TGCGTATTCC TGAAGAATAA
 
Protein sequence
MGLFNFVKDA GEKLWDAVTA NHDKDDQAKK VQEHLNKTGI PDADKVNVQI ADGKATVTGD 
GLSQEAKEKI LVAVGNIAGI SSVDDQVKTT TPAAESQFYT VKSGDTLSAI SKQVYGNANL
YNKIFEANKP MLKSPEKIYP GQVLRIPEE