Gene SeHA_C2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2948 
Symbol 
ID6488476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2889630 
End bp2890193 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content47% 
IMG OID642743106 
ProductDNA-invertase hin 
Protein accessionYP_002046730 
Protein GI194448250 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value1.3180099999999999e-20 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTACTA TTGGGTATAT TCGGGTGTCA ACAATTGACC AAAATATCGA TTTACAGCGT 
AATGCGCTTA CTAGTGCAAA TTGTGACCGC ATTTTTGAGG ACCGTATCAG TGGCAAGATT
GCAAACCGCC CCGGCCTGAA ACGAGCGTTA AAGTATGTAA ATAAAGGCGA TACTCTTGTC
GTCTGGAAAT TAGACAGACT GGGCCGCAGC GTGAAAAACC TGGTGGCGTT AATATCTGAA
TTACATGAAC GTGGAGCTCA CTTCCATTCT TTAACCGATA GTATTGATAC CAGTAGCGCG
ATGGGGCGAT TCTTTTTTCA TGTAATGTCA GCACTGGCCG AGATGGAGCG AGAATTAATT
GTCGAGCGAA CCCTTGCCGG ACTGGCTGCC GCCAGAGCGC AAGGACGACT GGGAGGGCGC
CCTCGGGCGA TCAATAGACA TGAACAGGAA CAGATTAGCC GGCTATTAGA GAAAGGCCAT
CCTCGGCAGC AATTAGCTAT TATTTTTGGT ATTGGCGTAT CTACCTTATA CAGATATTTT
CCGGCAAGCC GCATAAAAAA ATGA
 
Protein sequence
MATIGYIRVS TIDQNIDLQR NALTSANCDR IFEDRISGKI ANRPGLKRAL KYVNKGDTLV 
VWKLDRLGRS VKNLVALISE LHERGAHFHS LTDSIDTSSA MGRFFFHVMS ALAEMERELI
VERTLAGLAA ARAQGRLGGR PRAINRHEQE QISRLLEKGH PRQQLAIIFG IGVSTLYRYF
PASRIKK