Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2880 |
Symbol | |
ID | 6489413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 2814856 |
End bp | 2815593 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642743045 |
Product | outer membrane protein assembly complex subunit YfiO |
Protein accession | YP_002046669 |
Protein GI | 194448106 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.218907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGCA TGAAATATCT GGTGGCAGCA GCCACGTTGA GCCTGTTTCT GGCGGGTTGC TCGGGTTCAA AGGAAGAGGT GCCCGATAAT CCGCCGAATG AAATCTACGC GACTGCTCAG CAAAAGCTGC AGGACGGTAA CTGGAAACAG GCAATAACGC AATTGGAAGC GTTAGATAAT CGTTATCCAT TCGGACCGTA TTCTCAGCAG GTGCAGTTGG ATCTTATCTA CGCCTATTAC AAAAACGCCG ATTTGCCGCT AGCGCAGGCC GCCATCGATC GTTTTATGCG TCTTAATCCA ACGCACCCTA ATATTGACTA TGTCATGTAC ATGCGCGGCC TGACGAACAT GGCGCTGGAT GATAGCGCGC TGCAAGGTTT CTTTGGCGTC GATCGCAGCG ATCGCGATCC GCAACATGCG CGGGCGGCGT TCAATGACTT TTCGAAACTG GTACGCAGCT ATCCTAATAG CCAGTACACC ACCGATGCCA CTAAGCGTCT GGTATTCCTG AAAGACCGTC TGGCGAAATA TGAATATTCC GTCGCAGAGT ACTATACCGC GCGCGGCGCA TGGGTTGCGG TCGTAAACCG GGTAGAAGGT ATGCTACGCA ATTATCCTGA TACGCAGGCC ACGCGCGATG CGTTGCCGCT GATGGAAAAC GCCTATCGTC AGATGCAGCT GAATGCGCAG GCTGACAAAG TCGCGAAAAT TATTGCCGCT AACAGCAAAA ACACCTGA
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Protein sequence | MTRMKYLVAA ATLSLFLAGC SGSKEEVPDN PPNEIYATAQ QKLQDGNWKQ AITQLEALDN RYPFGPYSQQ VQLDLIYAYY KNADLPLAQA AIDRFMRLNP THPNIDYVMY MRGLTNMALD DSALQGFFGV DRSDRDPQHA RAAFNDFSKL VRSYPNSQYT TDATKRLVFL KDRLAKYEYS VAEYYTARGA WVAVVNRVEG MLRNYPDTQA TRDALPLMEN AYRQMQLNAQ ADKVAKIIAA NSKNT
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