Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2790 |
Symbol | |
ID | 6488536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 2724441 |
End bp | 2729375 |
Gene Length | 4935 bp |
Protein Length | 1644 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642742963 |
Product | hypothetical protein |
Protein accession | YP_002046590 |
Protein GI | 194448437 |
COG category | [R] General function prediction only |
COG ID | [COG2373] Large extracellular alpha-helical protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACATT TACGCGTGGT GGCCTGCATG ATCATGCTGG CGCTGGCGGG ATGCGATAAC AACGATAAAA CCGCCCCGAC GACTAAAAGC GAAGCGCCAG CCGTAGCGCA GCCCTCGCCC GCGCAAGACC CGGCACAGCT ACAAAAGCTG GCGCAGCAAA GCCAGGGCAA AGCGCTCACG CTATTAGACG CCTCCGAAGC GCAGCTCGAC GGCGCGGCGA CGCTGGTGCT GACGTTTTCA ATTCCTTTAG ATCCTGAACA GGATTTCTCC CGTGTGGTTC ACGTGGTTGA TAAGAAAAGC GGCAGCGTTG ACGGCGCATG GGAGCTGGCG CCAAATTTAA AAGAGCTAAG GTTACGTCAT CTGGAACCTG AGCGCGTGCT GGTGGTCACG GTTGATCCCG CCGTTAAGGC GCTGAATAAC GCCACCTTCG GCAAGTCTTA TGAAAAAACG ATTACCACGC GTGATGTCCA GCCCAGCGTC GGCTTTGCCA GCCGGGGATC GCTGCTACCG GGGAAAATCG CGGAAGGACT GCCGGTCATG GCGCTTAACG TCAACCACGT TGATGTGAAC TTTTTCCGCG TTAAGCCCGG ATCGCTGGCG TCATTTGTCA GCCAGTGGGA GTACCGTAGT TCTCTCTCTA ACTGGGAGTC CGACAATCTG CTGAAAATGG CGGATCTGGT TTATACCGGT CGTTTTGATC TTAATCCGGC GCGCAATACG CGTGAGAAAC TGCTGCTGCC ATTAAGCGAT ATTAAGCCGC TGCAACAGGC GGGCGTATAT GTGGCGGTAA TGAATCAGGC TGGACACTAC AACTATAGTA ATGCCGCTAC GTTGTTTACC CTTAGCGATA TCGGCGTGTC CGCGCACCGT TACCATAATC GGCTGGATAT CTTTACGCAA AGCCTGGAAA ACGGCGCGGC GCAGTCGGGA ATTGAGATCG TTCTTCTGAA TGATAAAGGT CAGACGCTGG CGCAGGCGAC GAGCGACGCG CAGGGACATG TGCAACTGGA GGCTGATAAA GCGGCGGCGC TATTACTGGC GCGTAAAGAG GAGCAGACCA CGCTGCTCGA TCTCACGCTT CCGGCTCTGG ATCTGTCGGA ATTTAATGTC GCTGGCGCGC CCGGCTACAG CAAGCAGTTC TTTATGTTCG GCCCGCGCGA TCTCTACCGA CCGGGCGAAA CGGTTATCCT CAACGGATTA CTGCGCGATA GCGACGGTAA AACGCTGCCC GATCAACCCG TTAAGCTGGA AGTGGTAAAA CCAGACGGAC AGGTGATGCG TACCGTCGTC AGCCAGCCGG AAAACGGGCT ATACCGTTTG AATTATCCGC TGGATATCAA CGCGCCGACC GGCTTGTGGC ATGTCCGCGC CAACACCGGC GATAATTTGC TGCGGAGTTG GGATTTCCAC GTGGAAGACT TTATGCCGGA GCGGATGGCG CTCAACCTGA CGGCGCAAAA AACACCGCTG GCGCCTGCGG ATGAGGTGAA ATTCTCCGTT GTCGGCTATT ACTTGTATGG GGCGCCTGCT AACGGCAATA CCCTGCAAGG GCAACTTTTC CTGCGTCCGC TGCGCGACGC TGTCGCGGCG TTGCCTGGCT TCCAGTTCGG CAATATTGCC GAAGAGAATC TTTCGCGCAG CCTGGACGAA GTTCAACTGA CGTTGGATAA AGGCGGACGT GGTGAAGTGA GTGCTGCCAG CCAGTGGCAA GAAGCGCATT CGCCGCTGCA GGTAATTCTA CAGGCCAGCC TGCTGGAGTC TGGCGGTCGT CCGGTCACTC GTCGCGTAGA GCAGGCGATT TGGCCTGCCG ATACGTTACC GGGAATTCGT CCACAGTTCG CCGCCAAAGC GGTATACGAC TACCGTACGG ATACCACCGT TAATCAACCG ATTGTCGACG AAGACAGCAA CGCCGCATTC GATATTGTTT ACGCCAACGC GCAGGGCGAG AAAAAAGCGG TGTCCGGTTT ACAGGTGCGG CTCATCCGCG AGCGTCGCGA CTATTACTGG AACTGGTCGG AAAGCGAAGG CTGGCAGTCG CAGTTTGATC AAAAAGATCT GGTGGAGGGC GAGCAGACGC TGGATCTGAA CGCGGATGAA ACCGGAAAAG TCAGCTTCCC GGTGGAATGG GGCGCGTACC GTCTGGAGGT CAAAGCGCCG AATGAGACGG TCAGCAGCGT TCGTTTCTGG GCCGGCTATA GCTGGCAGGA TAACAGCGAC GGTAGCGGCG CGGCGCGTCC GGATCGCGTC ACCCTCAAAC TGGATAAAGC GAGTTATCGT CCAGGCGATA CCATGAAATT GCATATCGCC GCGCCGGTCG CTGGTAAAGG TTATGCGATG GTGGAGTCCA GCGACGGTCC GCTGTGGTGG CAGGCGATCG ATGTGCCGGC ACAAGGTCTG GAGCTCACGA TTCCGGTGGA TAAAACCTGG AATCGCCACG ATCTCTATCT CAGTACGCTG GTGGTGCGTC CCGGCGATAA ATCTCGTTCC GCGACGCCAA AACGCGCCGT GGGGTTACTA CACCTACCGC TGGGGGATGA AAACCGCCGC CTCGATCTGG CGCTGGAAAG CCCGGCTAAA ATGCGCCCGA ATCAGCCGCT CACCGTCAGG GTGAAAGCCA GCGTTAAACA CGGCGAAATG CCAAAACAGA TCAACGTGCT GGTCTCCGCG GTCGATAGCG GCGTATTGAA TATCACCGAT TACGCGACGC CGGACCCGTG GCAGGCGTTC TTCGGTCAAA AACGCTACGG TGCGGATATC TACGATATTT ACGGCCAGGT CATTGAAGGG CAGGGGCGGC TGGCGGCGTT GCGTTTTGGC GGCGATGGCG ACGACCTTAA GCGCGGCGGA AAACCGCCGG TAAACCATGT CAATATCATC GCGCAGCAGG CGCAGCCGAT CACGCTCAAT GAGCAGGGCG AAGGGGTCGT AACGCTGCCG ATTGGCGACT TTAACGGCGA ACTGCGGGTT ATGGCGCAGG CATGGACAGC GGACGATTTT GGTCGCGGCG AAAGCAAAGT CGTTGTCGCC GCGCCAGTGA TTGCCGAGCT GAATATGCCG CGTTTTCTGG CGGGAGGGGA TGTTTCGCGA CTGGTGCTGG ACGTCACCAA TCTGACCGAC CGCCCGCAGA CGCTGAATAT TGCGCTCGCC GCCAGTGGGT TACTGGAACT GCTTAGTCAA CAGCCGCAAC CGGTCAACCT GGCGCCGGGC GTGCGCACCA CCTTATTCGT TCCGGTACGC GCGCTGGAAG GTTTTGGCGA AGGCGAAATC CAGGCGACCA TTAGCGGTCT GAATCTGCCG GAAGAAACCC TCGGCGCGCA GCATAAGCAG TGGCAAATCG GCGTGCGTCC GGCCTGGCCT GCCCAAACGG TAAATAGCGG CATTGCGCTG GCGCCGGGAG AGGGCTGGCA TGTACCAGAG CAGCATCTGG CAAACGTCTC GCCAGCCACG TTACAGGGAC AACTGCTATT AAGCGGAAAA CCGCCGCTCA ATCTGGCGCG CTACATTCGC GAGCTGAAAG CATATCCGTA CGGGTGCCTG GAACAAACCA CCAGCGGGTT ATTCCCGGCG CTGTATACCA ATGCCGCTCA ATTGCAGTCG CTCGGTATTA CCGGCGATAG TGATGAAAAA CGGCGCGCCG CGGTGGATAT CGGCATCTCC CGCATACTAC AGATGCAGCG TGATAACGGC GGTTTTGCGC TATGGGATGA AAATGGGGCG GAAGAGCCCT GGCTAACGGC CTACGCGATG GATTTCCTTA TTCGCGCGGG CGAGCAGGGA TATAGCGTCC CGCCGGAGGC CATTAACCGG GGCAATGAGC GACTGCTGCG CTATCTGCAG GATCCCGGTA CGATGCTGAT TCGTTATAGC GATAATACTC AGGCCAGTAC TTTTGCCGCT CAGGCTTACG CTGCGCTGGT ACTGGCGCGT CAGCAGAAAG CGCCGCTCGG CGCGCTGCGC GAAATCTGGG AGCGCCGTAG TCAGGCGGCT TCAGGACTGC CGCTGATGCA ATTGGGCATC GCGTTAAACA CGATGGGTGA TGCCAGACGC GGCGAAGAGG CCATTACGCT GGCTCTGAAT ACGCCGCGTC AGGACGAACG GCAATGGATA GCGGATTACG GCAGTTCTCT GCGCGATAAC GCTCTGATGT TGTCGCTACT GGAAGAGAAC AACCTCAGAC CGGACGCGCA AAACGCGCTA TTAAGCTCGC TTTCTGAGCA GGCCTTCGGT CAGCGCTGGC TCTCTACCCA GGAGAACAAT GCCTTGTTCC TCGCCGCGCA TTCGCGACAG GCCAGCGCGG GCGCCTGGCA GGCGCAGACC TCGTTAGAGG CGCAGCCGCT GTCGGGCGAC AAGGCGCTGA CCCGTAATCT GGATGCTGAC CAGTTGGCCA CCCTTGAGGT GACGAACACC GGTAGCCAGC CGCTATGGCT GCGTCTGGAT AGCAGCGGCT ATCCCTCATC TGCGCCTGAG CCTGCCAGCA ACGTTTTGCA GATTGAACGA CAAATACTGG GGACCGATGG TCAGCGCAAA TCGCTGTCCT CGTTGCGTAG CGGCGAACTG GTGCTGGTCT GGTTAACGGT AGTGGCCGAT CGCAATGTGC CGGATGCGCT GGTGGTGGAC CTGCTCCCGG CCGGGCTGGA GCTGGAAAAC CAGAATCTGG CTGACAGCAG CGCCAGCCTG CCGGAGAGCG GTAGCGAAGT GCAAAATCTG CTTAATCAGA TGCAGCAGGC GGATATTCAG TATATGGAAT TCCGCGACGA TCGGTTTGTG GCTGCCGTCG TTGTCAATGA GGGCCAGCCC GTGACGCTGG TCTACCTGGC GCGCGCGGTA ACGCCGGGGA CGTACCAGCT TGCGCAACCG CAGGTGGAAT CGATGTATGC GCCTCAGTGG CGGGCAACCG GCGCGAGCGA GGGGCTGCTG ATTGTGACGC CTTAA
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Protein sequence | MKHLRVVACM IMLALAGCDN NDKTAPTTKS EAPAVAQPSP AQDPAQLQKL AQQSQGKALT LLDASEAQLD GAATLVLTFS IPLDPEQDFS RVVHVVDKKS GSVDGAWELA PNLKELRLRH LEPERVLVVT VDPAVKALNN ATFGKSYEKT ITTRDVQPSV GFASRGSLLP GKIAEGLPVM ALNVNHVDVN FFRVKPGSLA SFVSQWEYRS SLSNWESDNL LKMADLVYTG RFDLNPARNT REKLLLPLSD IKPLQQAGVY VAVMNQAGHY NYSNAATLFT LSDIGVSAHR YHNRLDIFTQ SLENGAAQSG IEIVLLNDKG QTLAQATSDA QGHVQLEADK AAALLLARKE EQTTLLDLTL PALDLSEFNV AGAPGYSKQF FMFGPRDLYR PGETVILNGL LRDSDGKTLP DQPVKLEVVK PDGQVMRTVV SQPENGLYRL NYPLDINAPT GLWHVRANTG DNLLRSWDFH VEDFMPERMA LNLTAQKTPL APADEVKFSV VGYYLYGAPA NGNTLQGQLF LRPLRDAVAA LPGFQFGNIA EENLSRSLDE VQLTLDKGGR GEVSAASQWQ EAHSPLQVIL QASLLESGGR PVTRRVEQAI WPADTLPGIR PQFAAKAVYD YRTDTTVNQP IVDEDSNAAF DIVYANAQGE KKAVSGLQVR LIRERRDYYW NWSESEGWQS QFDQKDLVEG EQTLDLNADE TGKVSFPVEW GAYRLEVKAP NETVSSVRFW AGYSWQDNSD GSGAARPDRV TLKLDKASYR PGDTMKLHIA APVAGKGYAM VESSDGPLWW QAIDVPAQGL ELTIPVDKTW NRHDLYLSTL VVRPGDKSRS ATPKRAVGLL HLPLGDENRR LDLALESPAK MRPNQPLTVR VKASVKHGEM PKQINVLVSA VDSGVLNITD YATPDPWQAF FGQKRYGADI YDIYGQVIEG QGRLAALRFG GDGDDLKRGG KPPVNHVNII AQQAQPITLN EQGEGVVTLP IGDFNGELRV MAQAWTADDF GRGESKVVVA APVIAELNMP RFLAGGDVSR LVLDVTNLTD RPQTLNIALA ASGLLELLSQ QPQPVNLAPG VRTTLFVPVR ALEGFGEGEI QATISGLNLP EETLGAQHKQ WQIGVRPAWP AQTVNSGIAL APGEGWHVPE QHLANVSPAT LQGQLLLSGK PPLNLARYIR ELKAYPYGCL EQTTSGLFPA LYTNAAQLQS LGITGDSDEK RRAAVDIGIS RILQMQRDNG GFALWDENGA EEPWLTAYAM DFLIRAGEQG YSVPPEAINR GNERLLRYLQ DPGTMLIRYS DNTQASTFAA QAYAALVLAR QQKAPLGALR EIWERRSQAA SGLPLMQLGI ALNTMGDARR GEEAITLALN TPRQDERQWI ADYGSSLRDN ALMLSLLEEN NLRPDAQNAL LSSLSEQAFG QRWLSTQENN ALFLAAHSRQ ASAGAWQAQT SLEAQPLSGD KALTRNLDAD QLATLEVTNT GSQPLWLRLD SSGYPSSAPE PASNVLQIER QILGTDGQRK SLSSLRSGEL VLVWLTVVAD RNVPDALVVD LLPAGLELEN QNLADSSASL PESGSEVQNL LNQMQQADIQ YMEFRDDRFV AAVVVNEGQP VTLVYLARAV TPGTYQLAQP QVESMYAPQW RATGASEGLL IVTP
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