Gene SeHA_C2790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2790 
Symbol 
ID6488536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2724441 
End bp2729375 
Gene Length4935 bp 
Protein Length1644 aa 
Translation table11 
GC content58% 
IMG OID642742963 
Producthypothetical protein 
Protein accessionYP_002046590 
Protein GI194448437 
COG category[R] General function prediction only 
COG ID[COG2373] Large extracellular alpha-helical protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATT TACGCGTGGT GGCCTGCATG ATCATGCTGG CGCTGGCGGG ATGCGATAAC 
AACGATAAAA CCGCCCCGAC GACTAAAAGC GAAGCGCCAG CCGTAGCGCA GCCCTCGCCC
GCGCAAGACC CGGCACAGCT ACAAAAGCTG GCGCAGCAAA GCCAGGGCAA AGCGCTCACG
CTATTAGACG CCTCCGAAGC GCAGCTCGAC GGCGCGGCGA CGCTGGTGCT GACGTTTTCA
ATTCCTTTAG ATCCTGAACA GGATTTCTCC CGTGTGGTTC ACGTGGTTGA TAAGAAAAGC
GGCAGCGTTG ACGGCGCATG GGAGCTGGCG CCAAATTTAA AAGAGCTAAG GTTACGTCAT
CTGGAACCTG AGCGCGTGCT GGTGGTCACG GTTGATCCCG CCGTTAAGGC GCTGAATAAC
GCCACCTTCG GCAAGTCTTA TGAAAAAACG ATTACCACGC GTGATGTCCA GCCCAGCGTC
GGCTTTGCCA GCCGGGGATC GCTGCTACCG GGGAAAATCG CGGAAGGACT GCCGGTCATG
GCGCTTAACG TCAACCACGT TGATGTGAAC TTTTTCCGCG TTAAGCCCGG ATCGCTGGCG
TCATTTGTCA GCCAGTGGGA GTACCGTAGT TCTCTCTCTA ACTGGGAGTC CGACAATCTG
CTGAAAATGG CGGATCTGGT TTATACCGGT CGTTTTGATC TTAATCCGGC GCGCAATACG
CGTGAGAAAC TGCTGCTGCC ATTAAGCGAT ATTAAGCCGC TGCAACAGGC GGGCGTATAT
GTGGCGGTAA TGAATCAGGC TGGACACTAC AACTATAGTA ATGCCGCTAC GTTGTTTACC
CTTAGCGATA TCGGCGTGTC CGCGCACCGT TACCATAATC GGCTGGATAT CTTTACGCAA
AGCCTGGAAA ACGGCGCGGC GCAGTCGGGA ATTGAGATCG TTCTTCTGAA TGATAAAGGT
CAGACGCTGG CGCAGGCGAC GAGCGACGCG CAGGGACATG TGCAACTGGA GGCTGATAAA
GCGGCGGCGC TATTACTGGC GCGTAAAGAG GAGCAGACCA CGCTGCTCGA TCTCACGCTT
CCGGCTCTGG ATCTGTCGGA ATTTAATGTC GCTGGCGCGC CCGGCTACAG CAAGCAGTTC
TTTATGTTCG GCCCGCGCGA TCTCTACCGA CCGGGCGAAA CGGTTATCCT CAACGGATTA
CTGCGCGATA GCGACGGTAA AACGCTGCCC GATCAACCCG TTAAGCTGGA AGTGGTAAAA
CCAGACGGAC AGGTGATGCG TACCGTCGTC AGCCAGCCGG AAAACGGGCT ATACCGTTTG
AATTATCCGC TGGATATCAA CGCGCCGACC GGCTTGTGGC ATGTCCGCGC CAACACCGGC
GATAATTTGC TGCGGAGTTG GGATTTCCAC GTGGAAGACT TTATGCCGGA GCGGATGGCG
CTCAACCTGA CGGCGCAAAA AACACCGCTG GCGCCTGCGG ATGAGGTGAA ATTCTCCGTT
GTCGGCTATT ACTTGTATGG GGCGCCTGCT AACGGCAATA CCCTGCAAGG GCAACTTTTC
CTGCGTCCGC TGCGCGACGC TGTCGCGGCG TTGCCTGGCT TCCAGTTCGG CAATATTGCC
GAAGAGAATC TTTCGCGCAG CCTGGACGAA GTTCAACTGA CGTTGGATAA AGGCGGACGT
GGTGAAGTGA GTGCTGCCAG CCAGTGGCAA GAAGCGCATT CGCCGCTGCA GGTAATTCTA
CAGGCCAGCC TGCTGGAGTC TGGCGGTCGT CCGGTCACTC GTCGCGTAGA GCAGGCGATT
TGGCCTGCCG ATACGTTACC GGGAATTCGT CCACAGTTCG CCGCCAAAGC GGTATACGAC
TACCGTACGG ATACCACCGT TAATCAACCG ATTGTCGACG AAGACAGCAA CGCCGCATTC
GATATTGTTT ACGCCAACGC GCAGGGCGAG AAAAAAGCGG TGTCCGGTTT ACAGGTGCGG
CTCATCCGCG AGCGTCGCGA CTATTACTGG AACTGGTCGG AAAGCGAAGG CTGGCAGTCG
CAGTTTGATC AAAAAGATCT GGTGGAGGGC GAGCAGACGC TGGATCTGAA CGCGGATGAA
ACCGGAAAAG TCAGCTTCCC GGTGGAATGG GGCGCGTACC GTCTGGAGGT CAAAGCGCCG
AATGAGACGG TCAGCAGCGT TCGTTTCTGG GCCGGCTATA GCTGGCAGGA TAACAGCGAC
GGTAGCGGCG CGGCGCGTCC GGATCGCGTC ACCCTCAAAC TGGATAAAGC GAGTTATCGT
CCAGGCGATA CCATGAAATT GCATATCGCC GCGCCGGTCG CTGGTAAAGG TTATGCGATG
GTGGAGTCCA GCGACGGTCC GCTGTGGTGG CAGGCGATCG ATGTGCCGGC ACAAGGTCTG
GAGCTCACGA TTCCGGTGGA TAAAACCTGG AATCGCCACG ATCTCTATCT CAGTACGCTG
GTGGTGCGTC CCGGCGATAA ATCTCGTTCC GCGACGCCAA AACGCGCCGT GGGGTTACTA
CACCTACCGC TGGGGGATGA AAACCGCCGC CTCGATCTGG CGCTGGAAAG CCCGGCTAAA
ATGCGCCCGA ATCAGCCGCT CACCGTCAGG GTGAAAGCCA GCGTTAAACA CGGCGAAATG
CCAAAACAGA TCAACGTGCT GGTCTCCGCG GTCGATAGCG GCGTATTGAA TATCACCGAT
TACGCGACGC CGGACCCGTG GCAGGCGTTC TTCGGTCAAA AACGCTACGG TGCGGATATC
TACGATATTT ACGGCCAGGT CATTGAAGGG CAGGGGCGGC TGGCGGCGTT GCGTTTTGGC
GGCGATGGCG ACGACCTTAA GCGCGGCGGA AAACCGCCGG TAAACCATGT CAATATCATC
GCGCAGCAGG CGCAGCCGAT CACGCTCAAT GAGCAGGGCG AAGGGGTCGT AACGCTGCCG
ATTGGCGACT TTAACGGCGA ACTGCGGGTT ATGGCGCAGG CATGGACAGC GGACGATTTT
GGTCGCGGCG AAAGCAAAGT CGTTGTCGCC GCGCCAGTGA TTGCCGAGCT GAATATGCCG
CGTTTTCTGG CGGGAGGGGA TGTTTCGCGA CTGGTGCTGG ACGTCACCAA TCTGACCGAC
CGCCCGCAGA CGCTGAATAT TGCGCTCGCC GCCAGTGGGT TACTGGAACT GCTTAGTCAA
CAGCCGCAAC CGGTCAACCT GGCGCCGGGC GTGCGCACCA CCTTATTCGT TCCGGTACGC
GCGCTGGAAG GTTTTGGCGA AGGCGAAATC CAGGCGACCA TTAGCGGTCT GAATCTGCCG
GAAGAAACCC TCGGCGCGCA GCATAAGCAG TGGCAAATCG GCGTGCGTCC GGCCTGGCCT
GCCCAAACGG TAAATAGCGG CATTGCGCTG GCGCCGGGAG AGGGCTGGCA TGTACCAGAG
CAGCATCTGG CAAACGTCTC GCCAGCCACG TTACAGGGAC AACTGCTATT AAGCGGAAAA
CCGCCGCTCA ATCTGGCGCG CTACATTCGC GAGCTGAAAG CATATCCGTA CGGGTGCCTG
GAACAAACCA CCAGCGGGTT ATTCCCGGCG CTGTATACCA ATGCCGCTCA ATTGCAGTCG
CTCGGTATTA CCGGCGATAG TGATGAAAAA CGGCGCGCCG CGGTGGATAT CGGCATCTCC
CGCATACTAC AGATGCAGCG TGATAACGGC GGTTTTGCGC TATGGGATGA AAATGGGGCG
GAAGAGCCCT GGCTAACGGC CTACGCGATG GATTTCCTTA TTCGCGCGGG CGAGCAGGGA
TATAGCGTCC CGCCGGAGGC CATTAACCGG GGCAATGAGC GACTGCTGCG CTATCTGCAG
GATCCCGGTA CGATGCTGAT TCGTTATAGC GATAATACTC AGGCCAGTAC TTTTGCCGCT
CAGGCTTACG CTGCGCTGGT ACTGGCGCGT CAGCAGAAAG CGCCGCTCGG CGCGCTGCGC
GAAATCTGGG AGCGCCGTAG TCAGGCGGCT TCAGGACTGC CGCTGATGCA ATTGGGCATC
GCGTTAAACA CGATGGGTGA TGCCAGACGC GGCGAAGAGG CCATTACGCT GGCTCTGAAT
ACGCCGCGTC AGGACGAACG GCAATGGATA GCGGATTACG GCAGTTCTCT GCGCGATAAC
GCTCTGATGT TGTCGCTACT GGAAGAGAAC AACCTCAGAC CGGACGCGCA AAACGCGCTA
TTAAGCTCGC TTTCTGAGCA GGCCTTCGGT CAGCGCTGGC TCTCTACCCA GGAGAACAAT
GCCTTGTTCC TCGCCGCGCA TTCGCGACAG GCCAGCGCGG GCGCCTGGCA GGCGCAGACC
TCGTTAGAGG CGCAGCCGCT GTCGGGCGAC AAGGCGCTGA CCCGTAATCT GGATGCTGAC
CAGTTGGCCA CCCTTGAGGT GACGAACACC GGTAGCCAGC CGCTATGGCT GCGTCTGGAT
AGCAGCGGCT ATCCCTCATC TGCGCCTGAG CCTGCCAGCA ACGTTTTGCA GATTGAACGA
CAAATACTGG GGACCGATGG TCAGCGCAAA TCGCTGTCCT CGTTGCGTAG CGGCGAACTG
GTGCTGGTCT GGTTAACGGT AGTGGCCGAT CGCAATGTGC CGGATGCGCT GGTGGTGGAC
CTGCTCCCGG CCGGGCTGGA GCTGGAAAAC CAGAATCTGG CTGACAGCAG CGCCAGCCTG
CCGGAGAGCG GTAGCGAAGT GCAAAATCTG CTTAATCAGA TGCAGCAGGC GGATATTCAG
TATATGGAAT TCCGCGACGA TCGGTTTGTG GCTGCCGTCG TTGTCAATGA GGGCCAGCCC
GTGACGCTGG TCTACCTGGC GCGCGCGGTA ACGCCGGGGA CGTACCAGCT TGCGCAACCG
CAGGTGGAAT CGATGTATGC GCCTCAGTGG CGGGCAACCG GCGCGAGCGA GGGGCTGCTG
ATTGTGACGC CTTAA
 
Protein sequence
MKHLRVVACM IMLALAGCDN NDKTAPTTKS EAPAVAQPSP AQDPAQLQKL AQQSQGKALT 
LLDASEAQLD GAATLVLTFS IPLDPEQDFS RVVHVVDKKS GSVDGAWELA PNLKELRLRH
LEPERVLVVT VDPAVKALNN ATFGKSYEKT ITTRDVQPSV GFASRGSLLP GKIAEGLPVM
ALNVNHVDVN FFRVKPGSLA SFVSQWEYRS SLSNWESDNL LKMADLVYTG RFDLNPARNT
REKLLLPLSD IKPLQQAGVY VAVMNQAGHY NYSNAATLFT LSDIGVSAHR YHNRLDIFTQ
SLENGAAQSG IEIVLLNDKG QTLAQATSDA QGHVQLEADK AAALLLARKE EQTTLLDLTL
PALDLSEFNV AGAPGYSKQF FMFGPRDLYR PGETVILNGL LRDSDGKTLP DQPVKLEVVK
PDGQVMRTVV SQPENGLYRL NYPLDINAPT GLWHVRANTG DNLLRSWDFH VEDFMPERMA
LNLTAQKTPL APADEVKFSV VGYYLYGAPA NGNTLQGQLF LRPLRDAVAA LPGFQFGNIA
EENLSRSLDE VQLTLDKGGR GEVSAASQWQ EAHSPLQVIL QASLLESGGR PVTRRVEQAI
WPADTLPGIR PQFAAKAVYD YRTDTTVNQP IVDEDSNAAF DIVYANAQGE KKAVSGLQVR
LIRERRDYYW NWSESEGWQS QFDQKDLVEG EQTLDLNADE TGKVSFPVEW GAYRLEVKAP
NETVSSVRFW AGYSWQDNSD GSGAARPDRV TLKLDKASYR PGDTMKLHIA APVAGKGYAM
VESSDGPLWW QAIDVPAQGL ELTIPVDKTW NRHDLYLSTL VVRPGDKSRS ATPKRAVGLL
HLPLGDENRR LDLALESPAK MRPNQPLTVR VKASVKHGEM PKQINVLVSA VDSGVLNITD
YATPDPWQAF FGQKRYGADI YDIYGQVIEG QGRLAALRFG GDGDDLKRGG KPPVNHVNII
AQQAQPITLN EQGEGVVTLP IGDFNGELRV MAQAWTADDF GRGESKVVVA APVIAELNMP
RFLAGGDVSR LVLDVTNLTD RPQTLNIALA ASGLLELLSQ QPQPVNLAPG VRTTLFVPVR
ALEGFGEGEI QATISGLNLP EETLGAQHKQ WQIGVRPAWP AQTVNSGIAL APGEGWHVPE
QHLANVSPAT LQGQLLLSGK PPLNLARYIR ELKAYPYGCL EQTTSGLFPA LYTNAAQLQS
LGITGDSDEK RRAAVDIGIS RILQMQRDNG GFALWDENGA EEPWLTAYAM DFLIRAGEQG
YSVPPEAINR GNERLLRYLQ DPGTMLIRYS DNTQASTFAA QAYAALVLAR QQKAPLGALR
EIWERRSQAA SGLPLMQLGI ALNTMGDARR GEEAITLALN TPRQDERQWI ADYGSSLRDN
ALMLSLLEEN NLRPDAQNAL LSSLSEQAFG QRWLSTQENN ALFLAAHSRQ ASAGAWQAQT
SLEAQPLSGD KALTRNLDAD QLATLEVTNT GSQPLWLRLD SSGYPSSAPE PASNVLQIER
QILGTDGQRK SLSSLRSGEL VLVWLTVVAD RNVPDALVVD LLPAGLELEN QNLADSSASL
PESGSEVQNL LNQMQQADIQ YMEFRDDRFV AAVVVNEGQP VTLVYLARAV TPGTYQLAQP
QVESMYAPQW RATGASEGLL IVTP