| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2621 |
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| Symbol | mnmC |
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| ID | 6487628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | + |
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| Start bp | 2534767 |
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| End bp | 2536767 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642742801 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_002046435 |
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| Protein GI | 194447336 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.00000350397 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAACAAT ACGCCATACA ACCCGCCACA CTCGAATTTA ACGCTGAGGG TACACCTGTT
TCCCGAGATT TTGATGATGT CTATTTTTCT AATGACAATG GACTCGAAGA GACACGCTAC
GTTTTTCTTG GCGGCAATCG TCTTACGGAG CGATTTCCCG TACATTCACA TCCATTATTT
ATAGTCGCGG AAAGCGGTTT TGGCACCGGA CTCAACTTCC TGACGCTGTG GCAGGCGTTT
GACAGCTTTC GTTCTGCGCA CCCACAGGCG ACGCTGCAAA GGTTACATTT CATCAGTTTT
GAGAAATTCC CGTTAACGCG CGACGATCTG GCGCTGGCGC ACCAACACTG GCCGGAGCTC
GCGCCCTGGG CAGAGCAGCT GCAGGCGCAA TGGCCGCTGC CGCTCCCGGG GTGCCACCGA
CTATTGCTGG ATCGGAGCCG GGTGACGCTG GATTTGTGGT TTGGCGATAT TAATGAGCTG
ACCGACCAAC TGGACGCCAC GCTGAATCAA ACAGTCGACG CCTGGTTCCT CGACGGTTTT
GCCCCGGCTA AAAATCCGGA TATGTGGACG CCAAACCTGT TTAACGCGAT GGCGCGGCTG
GCGCGGCCCG GCGCAACGCT GGCGACGTTT ACCTCGGCGG GCTTCGTTCG TCGGGGATTA
CAGGAAGCCG GTTTTACCAT GCAAAAACGC AAAGGCTTCG GACGTAAACG CGAGATGCTT
TGCGGAGTGA TGGAACAACA CCTCATGCCG ACCCTTTCCG CGCCCTGGTT TTACCGCAGC
GGAAGCGAAA AACGTGAAAC GGCGATCATT GGCGGCGGCA TCGCCAGCGC GCTGTTATCA
CTGGCGTTAC TGCGTCGCGG CTGGCAGGTG ACCCTCTATT GCGCGGACGA CCAGCCCGCC
CAGGGCGCTT CCGGTAATCG ACAGGGCGCG CTTTATCCGC TCCTTAGCAA ACATGACGCC
GCCATTAATC GCTTTTTCCC GACCGCATTC ACCTTTGCCC GTCGCCTGTA TGATGCCCTG
CCCGTCTCTT TTGATCATGA CTGGTGCGGC GTGACGCAGC TCGGATGGGA TGAGAAAAGC
CAGCAGAAAA TTACCCAGAT GCTGTCCCTG GCGCTGCCCG CCGGACTGGC CTCGGCGCTC
AATGCCGAAG AGGCGGAACA GGCGGTTGGC GTGACGACAC GCTGCGGAGG AATTACCTAT
CCGGCAGGCG GCTGGCTGTG CCCGGAACAA TTAACTCGCG CAGTCATCGC ACTGGCGACC
GAACAGGGTT TACAAACGCG CTTTTGCCAT ACGCTCACGT CGCTCGTTGC GCAGGAGTCG
CGCTGGCAAC TGCGCTTTAC GTCAGGTGAA ACCGCCAGCC ATGAGACCGT CGTTCTGGCG
AACGGCCATC AGATTAACCG TTTTGATCAG ACCCGGCCGC TGCCGGTTTA TGCCGTCGGG
GGGCAGGTCA GTCATATTCC CACCACCTCC GCCCTCTCGG CGTTGCGTCA GGTGTTATGC
TACGACGGCT ATCTGACGCC GCAAAATCCG CATAATCAGC AGCACTGTAT TGGCGCCAGC
TATCACCGGG GCGACGAAAG CACCGTCTGG CGCGAAGAAG ATCAGCGTCA GAACCGACAG
CGTCTGCTTG ACTGTTTTCC GGATGCGAAA TGGGCCACAG AGGTTGACGT TAGCGGCAAC
AGCGCCCGTT GCGGCGTGCG TTGCGCCACC CGCGACCATC TGCCGATGGT GGGCAATGTC
CCGGATTACC ACGCCACGCT GACGCATTAC GCCGATTTAG CCGATAACAA AACGTCGGCG
GCGCCTGCGC CTGTGTATCC GGGTTTATTT GTGCTTGGCG CACTGGGATC GCGTGGTTTG
TGCTCAGCGC CATTATGCGC AGAAATTCTG GCGGCGCAGA TGAGTAACGA GCCGATTCCA
CTGGATGCCG GTACGCTGGC GGCGTTAAAT CCAAATCGGT TATGGGTGAG AAAGTTATTG
AAGGGAAAAG CGGTGAAGTA A
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| Protein sequence | MKQYAIQPAT LEFNAEGTPV SRDFDDVYFS NDNGLEETRY VFLGGNRLTE RFPVHSHPLF
IVAESGFGTG LNFLTLWQAF DSFRSAHPQA TLQRLHFISF EKFPLTRDDL ALAHQHWPEL
APWAEQLQAQ WPLPLPGCHR LLLDRSRVTL DLWFGDINEL TDQLDATLNQ TVDAWFLDGF
APAKNPDMWT PNLFNAMARL ARPGATLATF TSAGFVRRGL QEAGFTMQKR KGFGRKREML
CGVMEQHLMP TLSAPWFYRS GSEKRETAII GGGIASALLS LALLRRGWQV TLYCADDQPA
QGASGNRQGA LYPLLSKHDA AINRFFPTAF TFARRLYDAL PVSFDHDWCG VTQLGWDEKS
QQKITQMLSL ALPAGLASAL NAEEAEQAVG VTTRCGGITY PAGGWLCPEQ LTRAVIALAT
EQGLQTRFCH TLTSLVAQES RWQLRFTSGE TASHETVVLA NGHQINRFDQ TRPLPVYAVG
GQVSHIPTTS ALSALRQVLC YDGYLTPQNP HNQQHCIGAS YHRGDESTVW REEDQRQNRQ
RLLDCFPDAK WATEVDVSGN SARCGVRCAT RDHLPMVGNV PDYHATLTHY ADLADNKTSA
APAPVYPGLF VLGALGSRGL CSAPLCAEIL AAQMSNEPIP LDAGTLAALN PNRLWVRKLL
KGKAVK
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