Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2549 |
Symbol | menD |
ID | 6488058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 2463188 |
End bp | 2464858 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642742729 |
Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase |
Protein accession | YP_002046363 |
Protein GI | 194450319 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.255814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 0.871549 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGTAA GTGCATTTAA CCGGCGCTGG GCGGCGGTCA TCCTGGAAGC CTTAACCCGT CATGGCGTCA GGCATGTTTG TATCGCCCCT GGTTCCCGTT CCACGCCGCT CACGTTGGCG GCGGCAGAGA ATCCTGCTTT TATTCACCAT ACGCACTTTG ATGAGCGTGG GCTTGGTCAT CTGGCGTTAG GGCTGGCGAA AGTCAGCCAA CAGCCGGTTG CCGTTATTGT CACTTCAGGT ACCGCCGTGG CGAACCTCTA TCCGGCGCTG ATTGAGGCGG GTCTGACGGG CGAGAAGCTC ATTTTACTTA CCGCCGATCG CCCGCCGGAG CTGATTGACT GCGGCGCCAA CCAGGCGATC CGTCAGGCGG GGATGTTTGC CTCGCACCCC TCCCAAACTC TGTCGTTGCC GCGTCCCACG CAGGATATTC CGGCGCGCTG GCTGGTGTCG ACCATCGACA ATGCGCTCGC CATGCTTCAT GCGGGCGCGC TGCACATTAA CTGTCCTTTT GCCGAACCGC TGTATGGCGA TATGAATGAC ACCGGTCTGG TCTGGCAGCA GCGTCTCGGC GACTGGTGGC AGGATGAAAA ACCCTGGCTG CGCGAAGCGC GTCGACTGGC AAGCGACAAA CAGCGCGACT GGTTCTTCTG GCGACAAAAA CGCGGCGTCG TTGTCGCCGG GCGTATGAGC GCGGAAGAAG GCAAAAAAGT GGCGCAGTGG GCGCAAACTC TGGGATGGCC ATTAATTGGC GACGTATTGT CGCAAACCGG GCAGCCGCTG CCGTGCGCCG ACCTGTGGCT CGGCAACGCC AAAGCGGTGA CCGAACTGCA GCAGGCGCAG ATTGTCGTCC AGCTTGGCAG TAGCCTTACC GGAAAACGCT TACTGCAATG GCAGGCAACC TGCGAGCCGG AAGAGTACTG GGTAATCGAC AATATTGAAG GTCGTCTGGA CCCGGCGCAC CATCGTGGAC GCAGACTGGT AGCGAAAATC GCCGACTGGC TGGAACTGCA TCCGGCGGAA AAACGTAAAC CGTGGTGTGT AGAGATCCCG CGTCTGGCGG AACTGGCGTG GCAACGGGTG GTCGCGCAGC GAGACACCTT TGGCGAAGCG CAGCTGGCGC ACCGTATCCG CGACTATCTG CCGGAGCAGG GGCAATTGTT CGTGGGCAAT AGTCTGGTGG TGCGTCTGAT CGACGCGCTG TCGCAGTTGC CGGCCGGCTA TCCGGTATAC AGCAATCGCG GGGCGAGCGG CATTGACGGC CTGCTTTCCA CTGCGGCGGG CGTGCAGCGC GCCAGCGCCA AATCGACGTT GGCTATCGTC GGCGATTTAT CCGCGCTGTA CGATCTTAAC GCGCTGGCGT TACTACGTCA GGTATCCGCG CCGTTTGTGT TGATTGTGGT CAACAATAAC GGCGGGCAGA TTTTTTCCCT GCTGCCGACG CCGCAAAGCA AACGCGAGCG CTTTTATTTG ATGCCGCAAA ACGTCCATTT TGACCATGCG GCTGCCATGT TTAACCTGCG CTATCATCGC CCGGAAAACT GGGAAGAACT GGAGTCTGCG CTGGCTGGCG CGTGGCGAAC CCCGGCGGCA ACGGTGATTG AGCTGGTGGT AAACGATACG GACGGCGCGC AGACGTTGCA GCAACTTTTG GCTCAGGTAA GCCATCTATG A
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Protein sequence | MSVSAFNRRW AAVILEALTR HGVRHVCIAP GSRSTPLTLA AAENPAFIHH THFDERGLGH LALGLAKVSQ QPVAVIVTSG TAVANLYPAL IEAGLTGEKL ILLTADRPPE LIDCGANQAI RQAGMFASHP SQTLSLPRPT QDIPARWLVS TIDNALAMLH AGALHINCPF AEPLYGDMND TGLVWQQRLG DWWQDEKPWL REARRLASDK QRDWFFWRQK RGVVVAGRMS AEEGKKVAQW AQTLGWPLIG DVLSQTGQPL PCADLWLGNA KAVTELQQAQ IVVQLGSSLT GKRLLQWQAT CEPEEYWVID NIEGRLDPAH HRGRRLVAKI ADWLELHPAE KRKPWCVEIP RLAELAWQRV VAQRDTFGEA QLAHRIRDYL PEQGQLFVGN SLVVRLIDAL SQLPAGYPVY SNRGASGIDG LLSTAAGVQR ASAKSTLAIV GDLSALYDLN ALALLRQVSA PFVLIVVNNN GGQIFSLLPT PQSKRERFYL MPQNVHFDHA AAMFNLRYHR PENWEELESA LAGAWRTPAA TVIELVVNDT DGAQTLQQLL AQVSHL
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