Gene SeHA_C2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2458 
Symbolbcr 
ID6489421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2370070 
End bp2371260 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content54% 
IMG OID642742641 
Productbicyclomycin/multidrug efflux system 
Protein accessionYP_002046276 
Protein GI194450865 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0000150098 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCACCC GGCAGCACTC TTCCTTTGCC ATTGTCTTTA TCCTTGGCCT GTTGGCCATG 
TTAATGCCGC TGTCGATTGA TATGTATCTT CCAGCGCTGC CGGTGATTTC TGCGCAATTC
GGCGTGCCTG CCGGTAGCGC GCAGATGACG CTCAGCACCT ATATTCTGGG GTTTGCGCTG
GGTCAGCTTA TCTATGGACC GATGGCGGAT AGCCTCGGGC GTAAGCCGGT CATCCTGGGC
GGGACGCTGG TATTTGCCGC TGCGGCGGTC GCCTGTGCGT TGGCGCAGAC TATCGATCAA
CTGATCGTGA TGCGTTTCTT TCACGGTTTG GCGGCCGCGG CGGCAAGCGT CGTCATCAAT
GCGCTGATGC GGGATATTTA TCCAAAGGAA GAGTTTTCGC GCATGATGTC ATTTGTCATG
CTGGTCACTA CGATAGCGCC GTTAATGGCG CCCATTGTCG GGGGCTGGGT GTTGGTATGG
TTAAGCTGGC ACTATATCTT CTGGATACTG GCCATTGCGG CGATTCTGGC GTCAGTCATG
ATCTTTGCTT TGATTAAAGA GACGCTGCCC GTTGAGCGGC GTCAGCCTTT TCATATTCGT
ACCACAATAG GTAACTTTGC CGCGTTGTTT CGCCACAAAC GCGTACTGAG CTATATGCTG
GCGAGCGGGT TTAGTTTTGC CGGTATGTTC TCTTTTTTGA GCGCGGGGCC GTTTGTTTAT
ATCGAAATTA ATCATGTTCC GCCGCAGGAT TTCGGCTACT ACTTCGCGTT GAACATCGTA
TTTCTGTTTG TGATGACGAT TATCAACAGC CGTTTTGTCA GACGGGTAGG GGCGCTAAAC
ATGTTTCGGG CCGGGCTATG GATTCAGTTT GCGATGGCGG TGTGGATGGT TTTCAGCGCG
CTGATGGGCA TTGGATTCTG GGCGCTGGTG GTTGGCGTTG CGGCGTTTGT CGGCTGTGTG
TCGATGGTTT CGTCCAATGC GATGGCGGTC ATTTTGGATG AGTTTCCGCA TATGGCCGGA
ACGGCGTCTT CGTTGGCGGG CACTTTCCGC TTTGGTATTG GCGCTATCGT CGGCGCGTTG
CTGTCGCTGG CTACCTTTAA CAGTGCGTGG CCGATGATCT GGTCGATTGC GCTTTGCGCC
GCCTGTTCCA TTCTGTTTTA TCTCTACGCC AGCCGTCCCA AAAAACGGTG A
 
Protein sequence
MTTRQHSSFA IVFILGLLAM LMPLSIDMYL PALPVISAQF GVPAGSAQMT LSTYILGFAL 
GQLIYGPMAD SLGRKPVILG GTLVFAAAAV ACALAQTIDQ LIVMRFFHGL AAAAASVVIN
ALMRDIYPKE EFSRMMSFVM LVTTIAPLMA PIVGGWVLVW LSWHYIFWIL AIAAILASVM
IFALIKETLP VERRQPFHIR TTIGNFAALF RHKRVLSYML ASGFSFAGMF SFLSAGPFVY
IEINHVPPQD FGYYFALNIV FLFVMTIINS RFVRRVGALN MFRAGLWIQF AMAVWMVFSA
LMGIGFWALV VGVAAFVGCV SMVSSNAMAV ILDEFPHMAG TASSLAGTFR FGIGAIVGAL
LSLATFNSAW PMIWSIALCA ACSILFYLYA SRPKKR