Gene SeHA_C2318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2318 
SymbolrfbF 
ID6491059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2220969 
End bp2221742 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content44% 
IMG OID642742507 
Productglucose-1-phosphate cytidylyltransferase 
Protein accessionYP_002046142 
Protein GI194448173 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID[TIGR02623] glucose-1-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.0185666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGG TCATCCTGGC TGGTGGACTT GGTACCAGAC TAAGTGAAGA AACAATTGTA 
AAACCAAAAC CGATGGTAGA AATTGGTGGC AAGCCTATTC TTTGGCACAT TATGAAAATG
TATTCTGTGC ATGGTATCAA GGATTTTATT ATCTGCTGTG GTTATAAAGG ATATGTGATT
AAAGAATATT TTGCGAACTA CTTCCTTCAC ATGTCAGATG TAACATTCCA TATGGCTGAA
AACCGTATGG AAGTTCACCA TAAACGTGTT GAACCATGGA ATGTCACATT GGTTGATACG
GGTGATTCTT CAATGACTGG TGGTCGTCTG AAACGTGTTG CTGAATACGT AAAAGATGAC
GAGGCTTTCC TGTTTACTTA TGGTGATGGC GTTGCCGACC TTGATATCAA AGCGACTATC
GATTTCCATA AGGCTCACGG TAAGAAAGCG ACTTTAACAG CTACTTTTCC ACCAGGACGC
TTTGGCGCAT TAGATATCCG AGCTGGTCAG GTCCGGTCAT TCCAGGAAAA ACCGAAAGGC
GATGGGGCAA TGATCAATGG TGGTTTCTTT GTGTTGAATC CATCGGTTAT CGATCTCATC
GATAACGATG CAACAACCTG GGAACAAGAG CCATTAATGA CATTGGCACA ACAGGGGGAG
TTAATGGCTT TTGAACACCC AGGTTTCTGG CAGCCGATGG ATACCCTACG TGATAAAGTT
TACCTCGAAG GGCTGTGGGA AAAAGGTAAA GCTCCGTGGA AAACCTGGGA GTAA
 
Protein sequence
MKAVILAGGL GTRLSEETIV KPKPMVEIGG KPILWHIMKM YSVHGIKDFI ICCGYKGYVI 
KEYFANYFLH MSDVTFHMAE NRMEVHHKRV EPWNVTLVDT GDSSMTGGRL KRVAEYVKDD
EAFLFTYGDG VADLDIKATI DFHKAHGKKA TLTATFPPGR FGALDIRAGQ VRSFQEKPKG
DGAMINGGFF VLNPSVIDLI DNDATTWEQE PLMTLAQQGE LMAFEHPGFW QPMDTLRDKV
YLEGLWEKGK APWKTWE