Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C2288 |
Symbol | |
ID | 6490783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 2186294 |
End bp | 2188570 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642742478 |
Product | thiosulfate reductase |
Protein accession | YP_002046113 |
Protein GI | 194447345 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00880607 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 0.0980362 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTA GTCGTCGTTC TTTTTTGCAG GGGGTAGGCA TAGGCTGCTC TGCCTGCGCG CTGGGCGCTT TTCCGCCCGG GGCGCTGGCG CGCAACCCGA TTGCCGGCAT TAACGGTAAA ACCACGCTAA CGCCAAGTTT GTGCGAAATG TGTTCCTTTC GTTGCCCTAT TCAGGCGCAG GTAGTCAATA ACAAGACCGT TTTTATCCAG GGCAATCCTT CTGCGCCGCA GCAGGGGACG CGCATATGCG CCAGGGGCGG GAGCGGCGTC AGCCTGGTCA ATGACCCGCA ACGGATTGTA AAACCTATGA AACGCACCGG GCCACGCGGC GACGGTGAAT GGCAGGTGAT TAGCTGGCAA CAGGCTTACC AGGAAATCGC GGCGAAAATG AATGCCATCA AAGCGCAGCA TGGCCCCGAG AGCGTGGCTT TCTCTTCCAA ATCGGGCTCG CTCTCCAGCC ATCTTTTCCA TCTGGCTACG GCCTTTGGTT CGCCTAATAC CTTTACTCAC GCCTCAACAT GCCCTGCCGG GAAAGCCATT GCGGCAAAAG TGATGATGGG CGGCGATCTG GCGATGGATA TCGCTAACAC GCGCTATCTG GTTTCGTTTG GCCACAATTT GTATGAAGGG ATTGAAGTTG CCGATACCCA TGAGTTAATG ACCGCGCAGG AGAAGGGGGC CAAAATGGTG AGCTTCGATC CGCGTTTGTC GATATTTTCC AGCAAGGCGG ATGAGTGGCA CGCTATTCGT CCCGGGGGGG ATTTAGCGGT TCTGCTGGCG ATGTGCCATG TCATGATTGA TGAACAGCTC TACGATGCGT CTTTTGTTGA GCGTTATACC AGCGGATTTG AACAGTTAGC ACAGGCGGTA AAAGAGACGA CGCCGGAATG GGCCGCCGCG CAGGCCGATG TCCCAGCCGA CGTTATTGTC CGGGTGACAC GCGAACTGGC TGCCTGCGCG CCTCACGCTA TTGTCAGTCC TGGTCATCGC GCGACGTTCT CGCAGGAAGA GATCGATATG CGGCGTATGA TTTTTACGCT TAATGTGCTG CTCGGTAATA TTGAGCGCGA AGGCGGGCTA TATCAGAAAA AAAACGCGTC TGTTTACAAT AAACTGGCCG GAGAAAAGGT CGCGCCAACG CTGGCGAAAC TCAACATTAA AAATATGCCG AAACCGACGG CGCAACGCAT CGATTTGGTC GCACCGCAGT TTAAATATAT CGCCGCTGGC GGCGGCGTGG TGCAAAGCAT TATTGACTCG GCGTTAACCC AGAAGCCTTA CCCGATAAAG GCGTGGATTA TGTCGCGGCA TAATCCTTTC CAGACCGTCA CCTGTCGTTC GGACCTGGTA AAAACCGTTG AGCAACTGGA TCTGGTGGTC AGCTGCGATG TCTATTTGAG CGAGAGCGCG GCATATGCCG ACTATCTGCT GCCGGAATGC ACCTATCTCG AACGGGACGA AGAGGTATCC GATATGTCGG GACTGCACCC GGCTTACGCT CTGCGCCAAC AGGTCGTAGA GCCGATTGGC GAGGCGCGTC CGAGTTGGCA AATCTGGAAA GAACTTGGCG AGCAGTTGGG ATTAGGGCAG TACTATCCGT GGCAGGATAT GCAGACGCGC CAACTCTATC AGTTGAACGG CGACCATGCC TTAGCGAAGG AACTGCGACA GAAAGGGTAT CTCGAATGGG GCGTTCCGCT GCTATTACGC GAACCAGAAT CCGTTCGTCA GTTTACGGCG CGTTACCCCG GCGCTATCGC GACGGACAGT GACAACACCT ATGGCGAACA GCTTCGCTTC AAATCGCCCT CCGGCAAAAT CGAACTTTAT TCCGCAACCC TGGAGGAATT GCTCCCTGGC TACGGCGTTC CGCGCGTTCG TGACTTTGCG CTGAAAAAAG AGAATGAGCT TTACTTCATT CAGGGCAAGG TGGCCGTGCA TACCAATGGC GCGACGCAGT ACGTACCTTT ACTCAGCGAG CTAATGTGGG ATAACGCGGT CTGGGTTCAT CCGCAAACGG CGCAAGAAAA AGGCATTAAG ACCGGCGATG AGATCTGGCT GGAAAATGCC ACGGGTAAAG AGAAAGGTAA GGCGCTGGTG ACGCCCGGTA TCCGCCCGGA CACGCTTTTT GTCTATATGG GATTTGGCGC TAAAGCTGGG GCCAAAACGG CGGCGACGAC ACACGGTATC CACTGCGGAA ATTTACTGCC GCACGTGACG AGTCCGGTAT CCGGTACGGT AGTGCATACC GCAGGCGTGA CGCTGAGCCG GGCATGA
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Protein sequence | MSISRRSFLQ GVGIGCSACA LGAFPPGALA RNPIAGINGK TTLTPSLCEM CSFRCPIQAQ VVNNKTVFIQ GNPSAPQQGT RICARGGSGV SLVNDPQRIV KPMKRTGPRG DGEWQVISWQ QAYQEIAAKM NAIKAQHGPE SVAFSSKSGS LSSHLFHLAT AFGSPNTFTH ASTCPAGKAI AAKVMMGGDL AMDIANTRYL VSFGHNLYEG IEVADTHELM TAQEKGAKMV SFDPRLSIFS SKADEWHAIR PGGDLAVLLA MCHVMIDEQL YDASFVERYT SGFEQLAQAV KETTPEWAAA QADVPADVIV RVTRELAACA PHAIVSPGHR ATFSQEEIDM RRMIFTLNVL LGNIEREGGL YQKKNASVYN KLAGEKVAPT LAKLNIKNMP KPTAQRIDLV APQFKYIAAG GGVVQSIIDS ALTQKPYPIK AWIMSRHNPF QTVTCRSDLV KTVEQLDLVV SCDVYLSESA AYADYLLPEC TYLERDEEVS DMSGLHPAYA LRQQVVEPIG EARPSWQIWK ELGEQLGLGQ YYPWQDMQTR QLYQLNGDHA LAKELRQKGY LEWGVPLLLR EPESVRQFTA RYPGAIATDS DNTYGEQLRF KSPSGKIELY SATLEELLPG YGVPRVRDFA LKKENELYFI QGKVAVHTNG ATQYVPLLSE LMWDNAVWVH PQTAQEKGIK TGDEIWLENA TGKEKGKALV TPGIRPDTLF VYMGFGAKAG AKTAATTHGI HCGNLLPHVT SPVSGTVVHT AGVTLSRA
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