| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2241 |
|---|
| Symbol | cobQ |
|---|
| ID | 6487896 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 2147297 |
|---|
| End bp | 2148817 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642742432 |
|---|
| Product | cobyric acid synthase |
|---|
| Protein accession | YP_002046067 |
|---|
| Protein GI | 194451506 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1492] Cobyric acid synthase |
|---|
| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.386357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.07507 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGG CAGTTATGTT GCAGGGGACG GCATCCGACG TCGGCAAAAG TGTGCTGGTG
GCCGGTTTAT GCCGCATTTT TTATCAGGAT GGTCTGCGTA CCGCGCCGTT TAAATCGCAA
AATATGGCGC TTAATTCTGG TATTACGCCG GATGGTAAAG AGATGGGGCG GGCGCAAATT
TTTCAGGCGG AAGCCGCGGG GATCACGCCA GATGTGCGTA TGAACCCGGT GCTGCTCAAA
CCGACCAGCG ATCGCCAGGC GCAGGTCGTG CTGATGGGGA AAGTGGCGAC CAATATGGAT
GCGGTTAGTT ACCATGACTA TAAACCGCGT TTGCGTGAGC AAATCCTTGC GGTCTATAAC
AGCCTGGCGC AGGAATATGA CGTTATTGTG CTGGAAGGCG CCGGAAGCCC GGCGGAAATC
AATCTGCGCG ATCGCGATAT CGTCAATATG GGAATGGCGG AAATGGCCCA GTGTCCGGTT
ATTCTGGTGG CGGATATCGA CCGGGGCGGC GTATTCGCCG CTATTTATGG CACGCTGGCG
CTGCTGCATA AACAGGAGCG TGACAGAGTA AAGGGCGTCA TTATCAACAA ATTCCGCGGC
GACGTGGCGC TACTCTATTC CGGTATCGAA CAAATCGAAT CGCTTACCGG CGTCCCGGTC
CTGGGAGTGA TGCCATGGCT GGATGTGGAT CTGGAAGATG AAGATGGCGT CGCGCTGCAA
AACGATAAAT ATCGCGGTAA CGCCCCCCGT GATATCACTA TTGCCATTGT GCAACTGCCA
CATATTTCTA ACTTTACGGA TTTTAACGCT CTGGCGGCGC AGCCGGATGT GCGCATACGC
TATATTCGCC GCCCGGAAGC GTTGACTGAC GCTGATCTGG TGATCCTGCC GGGCAGTAAG
AATACGCTGA GCGACCTCGC CTGGCTGCGT GAAAGCGGGA TGGCGGATGC GGTATTGCAG
ACACATCGGC AGGGCGTGCC GGTGATGGGG ATTTGCGGCG GCTACCAGAT GCTGGGCGAC
ACCATTGTGG ATGAGGTGGA GTCGGGGCTG GGTACGCAGC CGGGCCTGGG GCTGCTTAAT
ACGATCACTC GCTTTGCACA GGATAAAACC ACGACGCAGG TTAACGCGAC AATGTCAGGC
GAGCTGCCCG GCTGGCTGGC TGCCGCGGCG GGGCTACCGG TACGCGGTTA TGAAATTCAC
ATGGGGGAAA CGGTGCTGCA GGAAGGATGC TGTACGGCCA TGACGTTACA GAAAAATGGA
TGCTCTGTGG CGGATGGCGC GGTCACCGCC GACGGACTGG CGTTTGGCAC TTACCTTCAC
GGCCTGTTTG ACAGCGATGC GTTTACCCGT GCGGTGGTCA ATGGGTTACG GGCGCGAAAA
GGACTTGCGC CGTGGGAAAC GACTTTTTGT TATGCGGAGC ATAAAGCGCG GCAATTTGAT
CTGCTGGCGG AAGCGATGCG GCAACATATT GATATTGATA AAATTTATAC CATCATGCAA
CAACATCAGG AGCCGGTATG A
|
|---|
| Protein sequence | MTQAVMLQGT ASDVGKSVLV AGLCRIFYQD GLRTAPFKSQ NMALNSGITP DGKEMGRAQI
FQAEAAGITP DVRMNPVLLK PTSDRQAQVV LMGKVATNMD AVSYHDYKPR LREQILAVYN
SLAQEYDVIV LEGAGSPAEI NLRDRDIVNM GMAEMAQCPV ILVADIDRGG VFAAIYGTLA
LLHKQERDRV KGVIINKFRG DVALLYSGIE QIESLTGVPV LGVMPWLDVD LEDEDGVALQ
NDKYRGNAPR DITIAIVQLP HISNFTDFNA LAAQPDVRIR YIRRPEALTD ADLVILPGSK
NTLSDLAWLR ESGMADAVLQ THRQGVPVMG ICGGYQMLGD TIVDEVESGL GTQPGLGLLN
TITRFAQDKT TTQVNATMSG ELPGWLAAAA GLPVRGYEIH MGETVLQEGC CTAMTLQKNG
CSVADGAVTA DGLAFGTYLH GLFDSDAFTR AVVNGLRARK GLAPWETTFC YAEHKARQFD
LLAEAMRQHI DIDKIYTIMQ QHQEPV
|
|---|
| |