Gene SeHA_C2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2175 
SymbolfliD 
ID6489764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2097033 
End bp2098436 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content49% 
IMG OID642742370 
Productflagellar capping protein 
Protein accessionYP_002046010 
Protein GI194448077 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.00699269 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTCAA TTTCATCATT AGGTGTGGGA TCAAACTTAC CGTTAGACCA GTTGTTGACA 
GACCTGACAA AGAACGAAAA AGGACGCTTA ACGCCAATTA CCAAACAGCA GAGCGCGAAT
TCGGCAAAGC TAACCGCCTA TGGCACATTG AAAAGCGCAT TAGAAAAATT CCAGACGGCA
AATACCGCGT TAAATAAAGC GGATTTATTT AAGTCTACCG TGGCGTCCAG CACGACAGAG
GACCTCAAAG TCAGTACTAC CGCAGGCGCT GCCGCAGGGA CTTATAAGAT TAGCGTAACC
CAGCTTGCCG CCGCGCAGTC GCTGGCGACA AAAACCACCT TCGCAACCAC CAAAGAGCAG
TTGGGCGATA CGTCGGTCAC GTCCCGGACA ATTAAAATTG AACAGCCGGG ACGTAAAGAG
CCGCTGGAAA TTAAGCTGGA TAAAGGCGAC ACCTCCATGG AGGCGATCCG TGACGCCATC
AATGACGCCG ACAGCGGTAT CGCCGCCAGT ATCGTTAAGG TCAAAGAGAA CGAATTCCAG
TTGGTGCTTA CCGCCAATAG CGGTACCGAC AATACGATGA AGATCACGGT GGAAGGCGAT
ACAAAACTTA ACGATCTACT CGCTTATGAC AGCACCACTA ATACCGGCAA TATGCAAGAG
CTGGTGAAAG CAGAAAACGC GAAGCTGAAC GTAAACGGCA TCGACATTGA GCGTCAGAGC
AATACCGTAA CCGACGCCCC TCAGGGAATT ACACTCACCC TGACGAAGAA AGTGACCGAC
GCGACCGTGA CGGTAACGAA AGATGATACC AAGGCGAAAG AGGCGATTAA ATCCTGGGTG
GATGCCTATA ACTCGCTGGT GGATACTTTT AGCTCATTAA CTAAATATAC CGCCGTTGAG
CCGGGCGAAG AAGCCAGCGA TAAAAACGGC GCGCTGTTAG GCGATAGTGT GGTTCGTACT
ATCCAGACCG GGATTCGGGC ACAATTTGCC AATAGCGGCA GTAATTCTGC GTTCAAAACA
ATGGCGGAAA TTGGCATCAC CCAGGATGGG ACTTCCGGCA AACTGAAGAT TGATGATGAT
AAGCTGACCA AAGTACTGAA AGATAACACA GCCGCAGCGC GTGAGCTGCT GGTGGGCGAT
GGTAAAGAAA CGGGGATCAC CACCAAAATT GCCACCGAAG TGAAAAGTTA TCTGGCGGAT
GACGGCATTA TTGATAATGC GCAGGACAAC GTTAACGCCA CGCTGAAAAG CCTGACAAAA
CAGTACCTGT CCGTTAGCAA CAGCATCGAT GAAACCGTTG CCCGTTACAA GGCCCAGTTT
ACCCAACTGG ATACCATGAT GAGTAAGCTG AATAACACCA GTAGTTATTT GACCCAGCAA
TTTACAGCTA TGAACAAGTC CTGA
 
Protein sequence
MASISSLGVG SNLPLDQLLT DLTKNEKGRL TPITKQQSAN SAKLTAYGTL KSALEKFQTA 
NTALNKADLF KSTVASSTTE DLKVSTTAGA AAGTYKISVT QLAAAQSLAT KTTFATTKEQ
LGDTSVTSRT IKIEQPGRKE PLEIKLDKGD TSMEAIRDAI NDADSGIAAS IVKVKENEFQ
LVLTANSGTD NTMKITVEGD TKLNDLLAYD STTNTGNMQE LVKAENAKLN VNGIDIERQS
NTVTDAPQGI TLTLTKKVTD ATVTVTKDDT KAKEAIKSWV DAYNSLVDTF SSLTKYTAVE
PGEEASDKNG ALLGDSVVRT IQTGIRAQFA NSGSNSAFKT MAEIGITQDG TSGKLKIDDD
KLTKVLKDNT AAARELLVGD GKETGITTKI ATEVKSYLAD DGIIDNAQDN VNATLKSLTK
QYLSVSNSID ETVARYKAQF TQLDTMMSKL NNTSSYLTQQ FTAMNKS