Gene SeHA_C2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2113 
Symbol 
ID6489863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2042126 
End bp2042866 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content54% 
IMG OID642742309 
Producthypothetical protein 
Protein accessionYP_002045952 
Protein GI194448488 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.00850732 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGGTC ATAGTAAATG GGCCAACACC AGACATCGTA AAGCTGCGCA GGATGCCAAG 
CGCGGTAAAA TCTTCACTAA AATTATTCGT GAACTGGTAA CGGCAGCTAA ATTGGGCGGC
GGCGATCCGG ATGCCAACCC GCGTCTGCGC GCGGCTGTAG ATAAAGCGCT GGCCAACAAC
ATGACCCGCG ACACTCTGAA CCGTGCCATC GCTCGCGGTG TGGGTGGTGA TGAAGACTCG
AACATGGAAA CCATCATCTA TGAAGGTTAT GGTCCTGGCG GCACGGCCAT TATGATTGAG
TGTCTGAGTG ACAACCGTAA CCGTACCGTA GCGGAAGTGC GTCATGCTTT CAGCAAGTGC
GGTGGTAATC TGGGTACCGA TGGCTCAGTG GCGTACCTGT TCAGTAAGAA AGGGGTCATC
TCCTTTGAGA AAGGCGATGA AGATACCATC ATGGAAGCTG CTCTGGAAGC CGGTGCGGAA
GATGTTGTGA CCTATGATGA TGGCGCGATT GATGTTTACA CTGCCTGGGA AGAGATGGGC
AAAGTGCGTG ACGCGCTGGA AGCGGCGAGT CTGAAAGCGG ACAGCGCCGA AGTGTCCATG
ATCCCGTCAA CCAAAGCGGA TATGGATGCG GAAACCGCGC CGAAACTGCT ACGTCTGATC
GATATGCTGG AAGACTGTGA CGATGTTCAG GAAGTCTACC ATAACGGTGA GATCTCTGAT
GAGGTGGCGG CGACCCTGTA A
 
Protein sequence
MAGHSKWANT RHRKAAQDAK RGKIFTKIIR ELVTAAKLGG GDPDANPRLR AAVDKALANN 
MTRDTLNRAI ARGVGGDEDS NMETIIYEGY GPGGTAIMIE CLSDNRNRTV AEVRHAFSKC
GGNLGTDGSV AYLFSKKGVI SFEKGDEDTI MEAALEAGAE DVVTYDDGAI DVYTAWEEMG
KVRDALEAAS LKADSAEVSM IPSTKADMDA ETAPKLLRLI DMLEDCDDVQ EVYHNGEISD
EVAATL