Gene SeHA_C2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C2104 
Symbol 
ID6490736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp2034101 
End bp2035420 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content55% 
IMG OID642742300 
Producthypothetical protein 
Protein accessionYP_002045943 
Protein GI194449514 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.391602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value0.665324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACAGA TAGCCCGCTC TGTCGCCCTG GCATTTAATA ATCTGCCCCG ACCCCACCGC 
GTTATGCTGG GGTCACTTAC CGTTCTGACA CTGGCCGTCG CCGTATGGCG GCCCTATGTT
TACCACCCAG AATCCGCACC AATCGTTAAA ACTATTGAAC TGGAGAAAAG CGAGATTCGT
TCCCTCTTAC CGGAGGCCAG CGAACCCATC GATCAGGCCG CGCAGGAAGA TGAAGCTATT
CCTCAGGATG AGCTGGACGA TAAAACCGCA GGCGAAGTCG GCGTCCATGA ATACGTCGTC
TCCACAGGCG ATACGTTAAG CAGCATTCTG AATCAGTACG GCATCGATAT GAGCGATATT
AGCCGACTTG CCGCTTCTGA TAAGGAGCTG CGCAATCTGA AAATTGGCCA ACAGCTTTCC
TGGACACTGA CCGCCGATGG CGATTTACAG CGTCTGACAT GGGAAGTCTC CCGCCGTGAA
ACGCGTACCT ACGATCGCAC TGCCAACGGT TTTAAAATGA GCAGTGAAAT GCAGCAGGGG
GACTGGGTTA ACAGTCTGCT GAAAGGTACG GTAGGGGGTA GCTTTGTCGC CAGCGCGAAA
GAGGCCGGTT TAACCAGCAG CGAAATCAGC GCAGTGATAA AAGCAATGCA GTGGCAGATG
GATTTTCGGA AGCTGAAAAA GGGCGATGAA TTTTCGGTTC TGATGTCGCG CGAGATGCTG
GATGGCAAGC GTGAACAGAG TCAGTTGTTG GGCGTGCGGA TGCGTTCCGA TGGTAAAGAT
TACTACGCCA TTCGCGCCGC TGACGGTAAA TTCTATGACC GTAATGGGGT TGGCCTGGCG
AAAGGCTTTT TACGCTTCCC GACCGCCAAA CAGTTCCGCA TCTCCTCCAA CTTCAATCCG
CGCCGTCTGA ACCCGGTTAC CGGACGCGTT GCGCCGCATC GTGGCGTTGA CTTTGCGATG
CCGCAGGGTA CGCCGGTGCT GTCGGTGGGG GATGGCGAGG TCGTGGTCGC TAAACGTAGC
GGCGCTGCCG GTTACTACAT TGCGATTCGT CATGGACGCA CCTACACCAC ACGTTACATG
CACTTGCGTA AGCTGCTGGT GAAACCGGGG CAAAAAGTGA AACGTGGCGA TCGTATTGCG
CTTTCTGGTA ACACCGGGCG TTCCACAGGG CCGCATCTGC ATTATGAGGT ATGGATCAAC
CAGCAAGCCG TTAACCCTCT GACAGCAAAA TTGCCGCGCA CGGAAGGTCT GACGGGGTCA
GATCGTCGTG AATACTTGGC ACAGGTGAAA GAGGTTCTGC CACAACTGCG CTTCGATTAA
 
Protein sequence
MQQIARSVAL AFNNLPRPHR VMLGSLTVLT LAVAVWRPYV YHPESAPIVK TIELEKSEIR 
SLLPEASEPI DQAAQEDEAI PQDELDDKTA GEVGVHEYVV STGDTLSSIL NQYGIDMSDI
SRLAASDKEL RNLKIGQQLS WTLTADGDLQ RLTWEVSRRE TRTYDRTANG FKMSSEMQQG
DWVNSLLKGT VGGSFVASAK EAGLTSSEIS AVIKAMQWQM DFRKLKKGDE FSVLMSREML
DGKREQSQLL GVRMRSDGKD YYAIRAADGK FYDRNGVGLA KGFLRFPTAK QFRISSNFNP
RRLNPVTGRV APHRGVDFAM PQGTPVLSVG DGEVVVAKRS GAAGYYIAIR HGRTYTTRYM
HLRKLLVKPG QKVKRGDRIA LSGNTGRSTG PHLHYEVWIN QQAVNPLTAK LPRTEGLTGS
DRREYLAQVK EVLPQLRFD