| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C2016 |
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| Symbol | rnd |
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| ID | 6488684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | - |
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| Start bp | 1961827 |
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| End bp | 1962954 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642742220 |
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| Product | ribonuclease D |
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| Protein accession | YP_002045863 |
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| Protein GI | 194448143 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00169692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.221518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAATTACC AAATGATTGA AACGGACGAT GCGCTGGCGA GCCTGTGTGA GGCTGTCCGC
GCATGTCCGG CTATTGCTTT AGATACGGAA TTTGTCCGTA CCCGCACCTA TTACCCGCAG
TTAGGATTGA TCCAGTTATT TGACGGGGCA AATGTCGCCC TGATCGATCC GCTCGGCATC
AGCGACTGGT CGCCGTTAAA AGCGGTGTTG CGCGATACGG GAATCACCAA ATTTCTGCAC
GCGGGTAGCG AAGATCTGGA AGTATTTCTG AATGCGTTTG GCGAACTGCC GGAACCCCTG
ATTGATACGC AAATTCTGGC GGCGTTTTGC GGGCGTCCGC TGTCGTGGGG TTTTGCGTCG
ATGGTAGAAG AGTATACGGG CGTGGCGCTG GACAAAAGCG AGTCTCGTAC CGACTGGTTA
GCCCGGCCTT TAAGCGAACG TCAGTGTGAA TACGCGGCGG CGGATGTCTG GTATCTGTTA
CCGATCGCCA AAAAGCTGAT GATTGAAACT GAAGCCGCAG GATGGCTGCC TGCCGCGCTT
GATGAGTGTC GGTTGATGCA GCAGCGCCGT CAGGAGATTC AGGCGCCGGA AGAAGCATGG
CGGGATATCA CCAATGCCTG GCAACTGCGT ACTCGCCAGT TAGCCTGTCT GCAACTTTTA
GCTGACTGGC GGCTACGTAA GGCGCGTGAG CGCGATATGG CGGTGAACTT TGTTGTGCGT
GAAGAAAATC TGTGGGCGGT CGCGCGTTAT ATGCCGGGCA GTCTCGGTGA GCTGGATAGC
CTGGGGCTTT CCGGCAGCGA GATTCGTTTT CATGGCAAGA CGTTGATATC GCTGGTGGCG
AAAGCACAGG CGCTACCGGA AGAGGCATTG CCGGAACCCC TGTTGAATCT GATGGACATG
CCGGGCTATC GCAAAGCGTT TAAAGCCATC AAAGCGCTGG TGGCGGAGGT GAGCGCGTCG
CATCACGTCA GCGGCGAGCT ACTGGCATCG CGTCGGCAGA TTAATCAGTT GCTTAACTGG
CACTGGAAAT TAAAACCGCA AAATGGGCAA CCGGAATTGA TTTCCGGCTG GCGCGCCGAA
CTGATGGAGG AGAAGTTAAC TCTTCTGTTG CAGGAGTATC CGCTTTAA
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| Protein sequence | MNYQMIETDD ALASLCEAVR ACPAIALDTE FVRTRTYYPQ LGLIQLFDGA NVALIDPLGI
SDWSPLKAVL RDTGITKFLH AGSEDLEVFL NAFGELPEPL IDTQILAAFC GRPLSWGFAS
MVEEYTGVAL DKSESRTDWL ARPLSERQCE YAAADVWYLL PIAKKLMIET EAAGWLPAAL
DECRLMQQRR QEIQAPEEAW RDITNAWQLR TRQLACLQLL ADWRLRKARE RDMAVNFVVR
EENLWAVARY MPGSLGELDS LGLSGSEIRF HGKTLISLVA KAQALPEEAL PEPLLNLMDM
PGYRKAFKAI KALVAEVSAS HHVSGELLAS RRQINQLLNW HWKLKPQNGQ PELISGWRAE
LMEEKLTLLL QEYPL
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