Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1960 |
Symbol | |
ID | 6490775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 1910348 |
End bp | 1911745 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642742165 |
Product | nitrite extrusion protein 1 |
Protein accession | YP_002045808 |
Protein GI | 194448532 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0440291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCACT TATCCGCCCC GGAAAGGGCA ACTGGCGCTG TTATCACGGA ATGGCGTCCG GAAGATCCGG CATTCTGGCA GCAGCGCGGC CATCGTGTCG CCAGCCGTAA TTTGTGGATT TCTGTGCCGT GTTTACTGCT GGCGTTTTGC GTCTGGATGC TATTCAGCGC AGTGGCGGTG AACCTGCCGA AAGTGGGATT TAATTTTACG ACCGATCAGC TCTTTATGTT GACTGCGCTG CCATCTGTTT CCGGCGCGCT GCTACGGGTG CCTTACTCCT TTATGGTGCC GCTATTTGGC GGACGTCGCT GGACAGCGTT CAGTACCGGT ATCCTCATCG TGCCCTGCGT ATGGTTAGGC TTTGCCGTTC AGGATACCAG TACGCCATTT AGCACCTTCA TTATTATTTC CTTGCTGTGT GGTTTTGCCG GCGCGAACTT TGCCTCCAGT ATGGCGAACA TCAGCTTTTT CTTTCCTAAA CAAAAGCAGG GCGGCGCGCT GGGTCTGAAC GGTGGTCTGG GCAATATGGG CGTGAGCGTG ATGCAACTGG TTGCGCCGCT GGTGGTTTCG CTCTCTATCT TTGCCGCCTT TGGCAGCCAC GGTGTAGAGC AGCCGGACGG TTCTCAGCTC TATCTGGCGA ACGCGGCCTG GATTTGGGTG CCTTTCCTGG CCATTTTTAC GCTGGCGGCG TGGTTCGGCA TGAACGAACT GGCGACGTCT AAGGCCTCGC TAAAAGAGCA ACTGCCGGTG CTCAAACGTG GTCATCTGTG GATCATGAGT CTGCTGTATC TGGCGACCTT CGGATCGTTT ATCGGTTTCT CCGCGGGGTT CGCGATGCTG TCTAAAACGC AATTCCCGGA TGTGCAGATC CTGCATTATG CGTTTTTCGG TCCGTTTATC GGCGCGCTGG CGCGTTCGGC AGGCGGCGCA ATTTCTGACC GTCTGGGGGG GACTCGCGTC ACGCTTATCA ACTTTGTCCT GATGGCGATT TTCAGCGGTC TGCTGTTCCT GACATTACCT ACTGGCGGCG TTGGCGGTAG CTTTATCGCG TTCTACGGGG TATTTCTGGC GCTGTTCCTG ACGGCTGGGT TGGGGAGTGG TTCTACCTTC CAGATGATCT CCGTTATCTT CCGTAAACTG ACAATGGACC GGGTAAAAGC GGAAGGCGGG TCGGAAGAAA GAGCCATGCG TGAAGCGGCA ACTGATACGG CGGCGGCGCT GGGCTTTATT TCCGCGATTG GCGCGATTGG CGGCTTTTTT ATTCCGAAAG CGTTTGGTTC ATCTTTAGCA TTAACCGGTT CTCCAGTCGG CGCGATGAAA GTCTTTCTTA TTTTCTATAT CGCCTGCGTC GTTATTACCT GGGCGGTATA TGGACGTCAT TCTAAAAATA AAAAGTAA
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Protein sequence | MSHLSAPERA TGAVITEWRP EDPAFWQQRG HRVASRNLWI SVPCLLLAFC VWMLFSAVAV NLPKVGFNFT TDQLFMLTAL PSVSGALLRV PYSFMVPLFG GRRWTAFSTG ILIVPCVWLG FAVQDTSTPF STFIIISLLC GFAGANFASS MANISFFFPK QKQGGALGLN GGLGNMGVSV MQLVAPLVVS LSIFAAFGSH GVEQPDGSQL YLANAAWIWV PFLAIFTLAA WFGMNELATS KASLKEQLPV LKRGHLWIMS LLYLATFGSF IGFSAGFAML SKTQFPDVQI LHYAFFGPFI GALARSAGGA ISDRLGGTRV TLINFVLMAI FSGLLFLTLP TGGVGGSFIA FYGVFLALFL TAGLGSGSTF QMISVIFRKL TMDRVKAEGG SEERAMREAA TDTAAALGFI SAIGAIGGFF IPKAFGSSLA LTGSPVGAMK VFLIFYIACV VITWAVYGRH SKNKK
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