Gene SeHA_C1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1827 
Symbol 
ID6489963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1788132 
End bp1789121 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content51% 
IMG OID642742042 
ProductD-lactate dehydrogenase 
Protein accessionYP_002045687 
Protein GI194449433 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG CCGTCTATAG TACCAAACAG TATGACAAGA AATATCTACA GCAAGTGAAC 
GAAGCGTTCG GTTTTGAACT GGAGTTTTTT GATTTTCTGC TGACCGAGAA AACAGCGAAA
ACCGCCAATG GATGTGAAGC AGTTTGTATC TTCGTGAATG ACGACGGGAG CCGACCGGTA
CTGGAAGAGC TGAAAAAACA CGGCGTGAAA TACATCGCGC TGCGTTGCGC CGGATTTAAT
AATGTCGACC TGGATGCCGC TAAAGAGCTC GGTTTGCAGG TGGTCCGCGT GCCGGCTTAT
TCTCCGGAAG CCGTCGCTGA ACATGCGATT GGCATGATGA TGACATTGAA CCGCCGTATT
CACCGCGCTT ATCAACGCAC CCGCGACGCT AACTTTTCCC TTGAGGGACT GACCGGCTTT
ACCATGCACG GAAAAACCGC TGGCGTCATT GGTACCGGTA AAATCGGCGT CGCCGCGCTG
CGTATCCTGA AAGGCTTTGG AATGCGTTTA CTGGCGTTTG ATCCCTATCC CAGCACCGCC
GCGCTTGACC TCGGCGTCGA GTATGTGGAT CTGCAAACGT TGTTTGCCGA ATCGGATGTC
ATTTCCCTGC ACTGCCCGCT CACGCCGGAA AACTACCATT TGCTGAACCA TGCAGCATTC
GATCAAATGA AAAATGGCGT TATGGTCATT AATACCAGTC GTGGCGCGCT GATTGATTCC
CAGGCGGCTA TCGAAGCTCT GAAGAATCAG AAAATCGGCT CGCTGGGGAT GGATGTGTAT
GAAAACGAAC GCGACCTGTT CTTTGAAGAT AAGTCAAACG ATGTTATCCA GGATGATGTT
TTCCGCCGTC TGTCGGCCTG CCATAACGTA CTGTTTACGG GGCACCAGGC ATTCCTGACC
GCAGAAGCGC TGATCAGCAT CTCTGAAACC ACGTTACAAA ACTTAAGCCA GCTTGAGAAG
GGCGAAGCCT GCCCGAACGC GCTGTTCTAA
 
Protein sequence
MKLAVYSTKQ YDKKYLQQVN EAFGFELEFF DFLLTEKTAK TANGCEAVCI FVNDDGSRPV 
LEELKKHGVK YIALRCAGFN NVDLDAAKEL GLQVVRVPAY SPEAVAEHAI GMMMTLNRRI
HRAYQRTRDA NFSLEGLTGF TMHGKTAGVI GTGKIGVAAL RILKGFGMRL LAFDPYPSTA
ALDLGVEYVD LQTLFAESDV ISLHCPLTPE NYHLLNHAAF DQMKNGVMVI NTSRGALIDS
QAAIEALKNQ KIGSLGMDVY ENERDLFFED KSNDVIQDDV FRRLSACHNV LFTGHQAFLT
AEALISISET TLQNLSQLEK GEACPNALF