Gene SeHA_C1733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1733 
SymbolnhaC 
ID6490462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1682132 
End bp1683583 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content52% 
IMG OID642741952 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_002045597 
Protein GI194448238 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID[TIGR00931] Na+/H+ antiporter NhaC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAT CACAAAACAA GAAGAAAACG CTGTCATTGG GTTTAGCGCT AATCCCAGTC 
ATCTCCATGT TGCTATTGTT GATTATCGGT TACGGCATCA TGGGGCTACG TATCGAACCG
CTCCTTCTAT GCTCTGCGGC GGTAGCGGCA GGCATTGCAT GGTGGCAAGG ATACTGTTGG
GAAGACATCA TCAACTCAGT GGTGGATAAA CTGGCTAAGG CAATGCCGGT TATCATGATC
CTGATCTGCG TGGGCGGTTT GATTGGCACC TGGATGTTTA GCGGCACCAT TCCCTACATG
GTGTACTGGG GGCTAAAACT CATAAGCCCG GAATATATTT TGATTGCAGC CTTCTTTTTA
ACCAGCGTGG TCTCCGTCTG TACCGGTACA TCGTGGGGGT CCGCCGGGAC GGTTGGCGTT
GCGTTAATGG GGGTTGCCGC CGGGCTGGAC GTGTCTCTTG CAGCAGCAGC TGGCGCCGTC
GTTTCTGGCG CTTATTTCGG CGACAAAATC TCACCGTTGT CCGACTCGAC TAACTTTGCC
GCGATTGTCG CAGACACTAC TCTGTTTGAG CATATTCAGC ATTTACTTTG GACGACCCTG
CCAAGTTTCC TGCTTGCCGC CGTGGTTTAT CTTATCGCCG GACACAGTAA TATGCTGGGC
GAGGTGGCCA CGCCGCAGCG CGTTACGGAC ATCATCCACT CGCTGGAGTC GCTATACCAT
TTTAATATTG TTCTTATTTT GCCGCCGGTG ATCGTACTGT GGGGCGCAAT TCGCAAGAAG
CCTGTCATCC CATTAATGTT AAGCGCCTGC GTACTTGCCT TATTCCTCGG CGTCATCATG
CAGGGACTGA GCATCAAACA GGGACTGGAC GCTTTCATTG ATGGATTTGA TATCGCCATG
TTCCCACAAG GCGCAGAAGG TGTCGTGGCC GATGTTCCGC GCCTGCTAAA CCGGGGCGGA
ATGTTCTCGA TGATGGGAAC AATACTGTTA GTTTTCTGCG CTTTTTCATT TGCCGGAGCG
CTAACGTTAA CCGGCGCGTT AACGATCATC ATTAACCGAC TGCTGACCAT TATTCATAGC
GTTGGTCAAC TCATTGCCGC CACTATCGGC ACCACAATTT TGGTCACAGG AGCGACCAGC
GACGGTAAAC TGGCATTGTT AGTTCCCGCC GAACTGTTTA AAGATGCCTA TCGTCGTATG
GGGCTGGATA CTAAAAACCT TTCACGGACG ATAGAAGATG CCGGTACCGT TATCGAACCT
CTCCTGCCGT GGACCTCGGC TGGCGTCTAC ATGGCAACCA CGCTGGGCGT TAGCACGCTT
GATCTTCTGC CCTGGGCTAT CCAGTGCTAT GCGGCAATCT TCTTCGCATT AATTTATGGT
TTTAGCGGAA TTGGTATTGC CAGAACTGCC TCCGCCTCAG AAAAGTCGCC GCAATCGTCA
GTGACGGAAT AA
 
Protein sequence
MSASQNKKKT LSLGLALIPV ISMLLLLIIG YGIMGLRIEP LLLCSAAVAA GIAWWQGYCW 
EDIINSVVDK LAKAMPVIMI LICVGGLIGT WMFSGTIPYM VYWGLKLISP EYILIAAFFL
TSVVSVCTGT SWGSAGTVGV ALMGVAAGLD VSLAAAAGAV VSGAYFGDKI SPLSDSTNFA
AIVADTTLFE HIQHLLWTTL PSFLLAAVVY LIAGHSNMLG EVATPQRVTD IIHSLESLYH
FNIVLILPPV IVLWGAIRKK PVIPLMLSAC VLALFLGVIM QGLSIKQGLD AFIDGFDIAM
FPQGAEGVVA DVPRLLNRGG MFSMMGTILL VFCAFSFAGA LTLTGALTII INRLLTIIHS
VGQLIAATIG TTILVTGATS DGKLALLVPA ELFKDAYRRM GLDTKNLSRT IEDAGTVIEP
LLPWTSAGVY MATTLGVSTL DLLPWAIQCY AAIFFALIYG FSGIGIARTA SASEKSPQSS
VTE