Gene SeHA_C1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1712 
Symbol 
ID6491800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp1663716 
End bp1664387 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID642741934 
Productputative regulatory protein 
Protein accessionYP_002045579 
Protein GI194447889 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTATAC CTGAGGTCAG GCAGGAGAGG CTCTATCAGA AGATAGCCAA CCTCATCATT 
AAGCTGATCA ATGATAATAT TTTTCCCCCG GGAACTTTTT TACCGCCAGA ACGCGAACTG 
GCAAAACAGC TTGGCGTGAG CCGCGCCTCC TTGCGAGAAG CCCTTATTGT ACTGGAGATC 
TCGGGATGGA TCGTGATTCA GTCCGGTAAT GGGGTTATCG TTTCAGATAA AAAACACCTT 
GCCAGCGACT ATACCATCGA AGAAATTCTC TCTACTCGCG AGCTGGTTGA TAGCCATTGT 
GCGCGCTTAG CCGCACAAAA CGATAACGTT GACGTCATCA ACCAAATAGA GGCGATTTAT 
CATCGTATGG ATCAAGCCAT TAACGATAAT AACGTCCACG GCTTTTACTC GCTGGATAAA 
GAGTTTCACC TTGCGATCTC TGAGGCTAGC CGTAACCGGG TGTTGTTCGA TATGTCCCGT 
ATGTTATGGG AACAACGGAT TAATATCCCT TATGCCGGGC TTGATGAGCA GTCTGGAGAC 
AGAAATGTTT TACTTAATCT CAACAAACAA CATAAAGCGA TAGTGGATGC GATGCGACAG 
TCTGATGCTG ACAGCGCCTA TGAGGGATCG CTGGAACATT TACGCTATGT GAGAAAGATT 
GTCGGCGGCT AA
 
Protein sequence
MVIPEVRQER LYQKIANLII KLINDNIFPP GTFLPPEREL AKQLGVSRAS LREALIVLEI 
SGWIVIQSGN GVIVSDKKHL ASDYTIEEIL STRELVDSHC ARLAAQNDNV DVINQIEAIY 
HRMDQAINDN NVHGFYSLDK EFHLAISEAS RNRVLFDMSR MLWEQRINIP YAGLDEQSGD 
RNVLLNLNKQ HKAIVDAMRQ SDADSAYEGS LEHLRYVRKI VGG