Gene SeHA_C1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1329 
Symbol 
ID6488013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1302122 
End bp1303087 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content57% 
IMG OID642741564 
ProductLysM domain/ErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_002045214 
Protein GI194450628 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.000107801 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCAACA ATACGCGACT CTCTCGCTGG TGGGCGTTGC TTGCGCTTAC CGCGACCATC 
ATGCTTGCCC TTCCCGCGCA GGCGAATACG TGGCCTCTTC CGCCCCCCGG CAGTCGACTG
GTGGGAGAAA ATAAATTCCA TGTCGTTGAA GACGACGGCG GCTCGCTGGA GGCGATCGCC
AAAAAATATA ACGTGGGCTT TTTAGCCCTG TTACAGGCCA ACCCCGGCAT TGATCCTTAC
GTACCACGCG CAGGCAGCGT GCTGACGATT CCGCTGCAAA CGCTGCTACC GGACGCGCCA
CGTGAAGGTA TCGTCATTAA CCTCGCGGAA TTACGGCTTT ACTATTATCA ACCGGGGAAA
AATACGGTCA CGGTCTACCC TATCGGGATT GGCCAACTGG GCGGCGATAC CCTGACGCCA
ACGATGGTGA CGACCATTTC GGATAAACGC GCCAATCCAA CCTGGACGCC GACCGCCAAT
ATTCGCGCCC GTTATAAAGC GCAAGGCATC GATCTCCCCG CCGTGGTGCC TGCCGGTCCC
GATAACCCAA TGGGGCATCA CGCGATTCGT TTAGCGGCCT ACGGCGGCGT CTATCTGTTA
CATGGCACGA ATGCCGATTT TGGCATTGGT ATGCGCGTCA GTTCCGGCTG TATCCGTCTG
CGCGACGGTG ATATAGAGAC ATTGTTCCGT CAGGTCACGC CGGGAACCAA AGTGAATATA
ATCAATACGC CGATTAAAGC CTCGGTGGAG CCAGGCGGCG TGCGACTGGT GGAAGTTCAT
CAGCCGCTGT CTAAAAATAT AGGCGACGAT CCGCAGGTGT TGCCGATTGT GCTGAATGGC
CCGATGCAGA CCTTTAAGGA CGCGCCGCAG ACCGACGCCG CGGTGATGGA ACATGTTATG
GAAGTGCGTT CCGGAATGCC GGTGGATGTA ACCCGTCAAT CAGAGGCGAA ACCGCAGTCG
CTGTAA
 
Protein sequence
MFNNTRLSRW WALLALTATI MLALPAQANT WPLPPPGSRL VGENKFHVVE DDGGSLEAIA 
KKYNVGFLAL LQANPGIDPY VPRAGSVLTI PLQTLLPDAP REGIVINLAE LRLYYYQPGK
NTVTVYPIGI GQLGGDTLTP TMVTTISDKR ANPTWTPTAN IRARYKAQGI DLPAVVPAGP
DNPMGHHAIR LAAYGGVYLL HGTNADFGIG MRVSSGCIRL RDGDIETLFR QVTPGTKVNI
INTPIKASVE PGGVRLVEVH QPLSKNIGDD PQVLPIVLNG PMQTFKDAPQ TDAAVMEHVM
EVRSGMPVDV TRQSEAKPQS L