Gene SeHA_C1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1275 
SymbolpyrC 
ID6492224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1252861 
End bp1253907 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content54% 
IMG OID642741512 
Productdihydroorotase 
Protein accessionYP_002045162 
Protein GI194451747 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value0.78408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC CATCCCAGGT TTTAAAGATC CGCCGCCCGG ACGACTGGCA CGTTCACCTT 
CGCGATGGCG ACATGTTAAA AACGGTCGTA CCCTATACCA GCGAAATTTA TGGTCGCGCT
ATCGTGATGC CGAACCTGGC GTCCCCCATC ACGACCGTTG ATGCAGCGAT CGCCTACCGC
CAGCGTATTC TCAATGCGGT GCCCGCCGGG CATGATTTCA CGCCGTTAAT GACCTGCTAT
TTAACGGATT CGCTCGATGC CGATGAACTG GAGCGTGGTT TCCATGAAGG CGTGTTTACT
GCGGCTAAGC TTTACCCGGC CAATGCCACC ACTAACTCCA GTCATGGCGT AACGTCAGTC
GACGCTATCA TGCCGGTACT GGAGCGGATG GAAAAACTCG GAATGCCATT ACTGGTCCAC
GGTGAGGTGA CCCATGCGGA TGTTGATATC TTCGATCGCG AAGCGCGTTT TATCGACACC
GTAATGGAAC CGCTACGCCA GCGTCTGACC ACGCTTAAAG TGGTCTTTGA GCACATCACG
ACCAAAGATG CCGCGCAGTA TGTCCGTGAC GGCAACGACT ACCTGGCGGC TACCATTACG
CCTCAACATT TAATGTTTAA CCGTAATGAT ATGCTGGTCG GCGGCATTCG TCCTCACCTG
TACTGTCTGC CGATTCTGAA ACGCAATATT CACCAACAGG CGTTACGCGA ACTGGTTGCC
AGTGGTTTTA CGCGCGCCTT CCTGGGGACG GATTCAGCGC CGCATTCACG TCATCGTAAA
GAGACTAGTT GCGGCTGCGC CGGTTGTTTC AACGCTCCAT CCGCCCTTGG CAGTTATGCC
GCCGTGTTTG AGGAAATGAA CGCGCTGGCG CACTTTGAAG CGTTCTGTTC ACTGAATGGC
CCGCAATTCT ATGGCCTGCC GGTGAATGCG GGGTGGGTGG AACTGGTTCG CGATGAACAA
CAGATACCGG GAAATATCGC GCTGGCTGAT GATTCGCTGG TGCCTTTTTT AGCGGGTGAA
ACAATACGCT GGTCAGTAAA AAAATAA
 
Protein sequence
MTAPSQVLKI RRPDDWHVHL RDGDMLKTVV PYTSEIYGRA IVMPNLASPI TTVDAAIAYR 
QRILNAVPAG HDFTPLMTCY LTDSLDADEL ERGFHEGVFT AAKLYPANAT TNSSHGVTSV
DAIMPVLERM EKLGMPLLVH GEVTHADVDI FDREARFIDT VMEPLRQRLT TLKVVFEHIT
TKDAAQYVRD GNDYLAATIT PQHLMFNRND MLVGGIRPHL YCLPILKRNI HQQALRELVA
SGFTRAFLGT DSAPHSRHRK ETSCGCAGCF NAPSALGSYA AVFEEMNALA HFEAFCSLNG
PQFYGLPVNA GWVELVRDEQ QIPGNIALAD DSLVPFLAGE TIRWSVKK