Gene SeHA_C1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1237 
Symbol 
ID6492127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp1220004 
End bp1220885 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content50% 
IMG OID642741474 
ProductRpiR family transcriptional regulator 
Protein accessionYP_002045125 
Protein GI194450499 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value0.676137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCTC AACCCCCACG TCTTAAACCC GGAAAAATCC TTGACACTCT GGGTGCTATG 
CAAAAAAGCC TGACACGTGC CTCCCAGCGT ATTGCGCAAT ATATTTTAGC CTTCCCCAGA 
CAGGTGACAC AGTCATCTAT TGCCGATTTG TCGCGCGACA CACAGGCCGG AGAAGCCACG 
GTTATTCGCT TTTGTCGCAC CCTGGGCTAT AAAGGTTTTC AGGATTTTAA AATGGACCTG 
GCCATTGAAC TTGCCACTAC CGAGTCTGAT GACAGTAGTC CTCTACTGGA TGCCGAAGTT 
AGCGAATCCG ACGATGCCCA CGCCATTGGT TTAAAATTGC AGAACACCAT TAGTAATGTA 
TTATCTGAAA CGCTAAATCT GCTTGATATG CAACAGGTTC TCGGTGTCGT GGACGCCCTA 
CGTCACTGTC ACTCAGTTTA TATCTTTGGT GTGGGCTCAT CGGGGATCAC GGCGCTGGAT 
ATGAAACACA AGCTAATGCG TATTGGTTTA CGGGGCGATG CGGTAAGCAA TAACCATTTT 
ATGTACATGC AGGCTACGCT ATTAAAAGCA GGCGATGTCG CGATGGGTGT CAGTCACTCG 
GGCACATCGC CAGAAACAGT GCATTCACTC CGATTGGCCC GACAGGCTGG CGCCACCACT 
GTCGCCATTA CCCATAATCT GGGTTCTCCA TTATGTGAAG AGGCCGATTT TTGCCTGATC 
AATGGTAATC GGCAAGGAAT GTTGCAGGGT GACTCGATCG GTACGAAAGC CGCGCAGCTT 
TTCGTCTTTG ACCTGCTCTA TACCCTTCTT GTACAGTCCT CGCCGGAACA GGCCCGAGAA 
AGCAAATTAC GGACAATGAA TGCCCTGGAC ATGACAAAAT AA
 
Protein sequence
MEPQPPRLKP GKILDTLGAM QKSLTRASQR IAQYILAFPR QVTQSSIADL SRDTQAGEAT 
VIRFCRTLGY KGFQDFKMDL AIELATTESD DSSPLLDAEV SESDDAHAIG LKLQNTISNV 
LSETLNLLDM QQVLGVVDAL RHCHSVYIFG VGSSGITALD MKHKLMRIGL RGDAVSNNHF 
MYMQATLLKA GDVAMGVSHS GTSPETVHSL RLARQAGATT VAITHNLGSP LCEEADFCLI 
NGNRQGMLQG DSIGTKAAQL FVFDLLYTLL VQSSPEQARE SKLRTMNALD MTK