Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C1173 |
Symbol | |
ID | 6491109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 1159910 |
End bp | 1161550 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642741414 |
Product | paraquat-inducible protein B |
Protein accession | YP_002045066 |
Protein GI | 194449997 |
COG category | [R] General function prediction only |
COG ID | [COG3008] Paraquat-inducible protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.371767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 0.608659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCTA AAAAAGGGGA AGCCAAAGTA CAAAAGGTGA AAAATTGGTC GCCTGTCTGG ATATTCCCGA TTGTTACTGC GCTTATCGGA GCCTGGATTC TGTTTTATCA CTACAGCCAC CAGGGACCGG AAGTTACCTT AATCACCACC AATGCGGAAG GCATTGAAGG CGGAAAAACG ACGATCAAAA GTCGCAGCGT GGATGTCGGC GTGGTTGAAA GCGCGACGCT GACTGACGAT CTGACCCACG TACAAATCAA AGCGCGGCTC CATTCCGGTA TGGAAAAGTT GCTGCATAAA GACTCGGTAT TTTGGGTGGT AAAACCGCAG GTGGGGCGTG AAGGCATCAG CGGGCTTGGG ACGCTGCTAT CAGGCGCGTA TATTGAACTA CAACCAGGAA GTAAGGGCAG TCAGCCGGAA AGCTATCAGC TTCTTGACTC ACCGCCGTTG GCGCCGCCCG ATGCCAAAGG TATTCGTGTG ATTCTGGACA GCAAAAAGGC CGGTCAGCTC AGTCCTGGCG ATCCCGTTCT GTTCCGGGGT TATCGGGTAG GATCCGTTGA AACCAGCTCT TTCGATCCGC AAAAACGGAC AATGAGTTAT CAGTTGTTCA TTAAGGCGCC AAACGATCGA TTGGTCACCA GTAATGTCCG ATTCTGGAAA GATAGCGGTA TCGCTGTGGA TCTGACATCG GCGGGAATGC GCGTGGAAAT GGGATCGTTG ACGACGTTGT TTGGCGGCGG CGTGAGTTTT GATGTGCCGG AAGGACTTGA GCAGGGGCAA CCCGTCGCCG AAAAAACGGC GTTTAATCTC TACGACGATC AAAAAAGTAT TCAGGATTCG CTGTACACCG ATCATATCGA TTACCTGATG TTCTTTAAAG ATTCGGTGCG CGGATTACAA CCCGGCGCGC CGCTGGAGTT CCGCGGTATT CGTCTGGGGA CGGTAAGCAA AGTGCCTTTC TTTGCGTCTA AAATGCGCCA GGTATTTAAC GACGATTACC GTATTCCTGT GCTGGTGCGC ATTGAACCGG AGCGTCTGAA AGCGCAATTG GGAGAAAATG CGGATGTTGG CGCGCATTTG ACGGAACTGC TTAAGCGCGG TTTACGCGCT TCGCTTAAAA CCGGTAACCT GGTGACCGGG GCGCTGTATG TCGATCTGGA CTTTTATCCT AAGGAGCCGC CGATTACCGG GCTACGCGAA TTTGATGGTT ATGAAATTAT TCCCACCGTC AGCAGCGGTC TGGCGCAAAT TCAACAGCGA CTGGTGGAAA CGTTGGATAA GATCAACAAC CTGCCGTTGA ATCCGATGAT TGAACAAGCG ACCAATACGC TGTCTGAAAG CCAGCGTACT ATGCGTCGGC TGCAAACCAC GCTGGATAAT ATGAACAAGA TTACCTCCAG TCAGTCGATG CAGCAGCTTC CGGCGGATAT GCAAACGACG TTACGCGAAC TTAACCGCAG TATGCAAGGC TTCCAGCCTG GATCGGCGGC GTATAACAAA ATGGTGGCGG ATATGCAGCG TCTCGATCAG GTGCTTCGTG AGTTACAACC GGTGTTGAAA ACTCTGAACG AGAAGAGCAA CGCGCTGGTA TTTGAAGCGA AGGATAAAAA AGATCCTGAG CCTAAGAGGG CGAAACAATG A
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Protein sequence | MEPKKGEAKV QKVKNWSPVW IFPIVTALIG AWILFYHYSH QGPEVTLITT NAEGIEGGKT TIKSRSVDVG VVESATLTDD LTHVQIKARL HSGMEKLLHK DSVFWVVKPQ VGREGISGLG TLLSGAYIEL QPGSKGSQPE SYQLLDSPPL APPDAKGIRV ILDSKKAGQL SPGDPVLFRG YRVGSVETSS FDPQKRTMSY QLFIKAPNDR LVTSNVRFWK DSGIAVDLTS AGMRVEMGSL TTLFGGGVSF DVPEGLEQGQ PVAEKTAFNL YDDQKSIQDS LYTDHIDYLM FFKDSVRGLQ PGAPLEFRGI RLGTVSKVPF FASKMRQVFN DDYRIPVLVR IEPERLKAQL GENADVGAHL TELLKRGLRA SLKTGNLVTG ALYVDLDFYP KEPPITGLRE FDGYEIIPTV SSGLAQIQQR LVETLDKINN LPLNPMIEQA TNTLSESQRT MRRLQTTLDN MNKITSSQSM QQLPADMQTT LRELNRSMQG FQPGSAAYNK MVADMQRLDQ VLRELQPVLK TLNEKSNALV FEAKDKKDPE PKRAKQ
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