Gene SeHA_C1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1171 
Symbol 
ID6489122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1156730 
End bp1158637 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content53% 
IMG OID642741412 
ProductABC transporter ATPase component 
Protein accessionYP_002045064 
Protein GI194451712 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.311518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTAA TCAGTATGCA TGGCGCATGG CTGTCGTTCA GCGACGCGCC GCTTCTCGAT 
AACGCAGAGT TGCATATCGA AGATAACGAA CGCGTCTGTC TGGTGGGGCG TAACGGCGCC
GGGAAATCCA CCTTGATGAA GATCCTCAAC CGCGAACAGG GTCTGGACGA TGGGCGTATT
ATTTATGAGC AGGATCTGAT CGTCGCGCGT CTGCAACAGG ACCCGCCCCG TAATATTGCG
GGCAGCGTCT ATGACTTTGT CGCCGAAGGT ATCGAAGAAC AAGCGGAATA CCTCAAGCGC
TATCATGAGA TTTCCCGTCT GGTGATGACC GATCCCAGCG AGAAAAACCT CAATGAAATG
GCGCGCGTAC AGGAACAGCT CGATCATCAT AATCTGTGGC AGCTGGAAAA CCGTATTAAT
GAAGTGCTGG CGCAGCTTGG ACTCGATCCT AACGCCGCGC TGTCGTCGCT CTCCGGCGGC
TGGCTGCGTA AAGCCGCGCT GGGTCGGGCG CTGGTCAGCA ATCCGCGCGT ATTGTTACTG
GATGAACCGA CTAACCATCT GGATATCGAA ACTATCGACT GGCTGGAAGG GTTTCTGAAA
ACCTTTAACG GAACGATTAT TTTTATCTCT CACGATCGTT CGTTTATTCG CAATATGGCA
ACCCGCATTG TCGATCTCGA TCGTGGCAAA CTGGTCACCT ATCCGGGAAA TTACGATCAA
TACCTGCTGG AGAAAGAAGA AGCGCTGCGC GTAGAAGAAT TACAAAACGC GGAATTTGAT
CGCAAACTGG CGCAGGAAGA AGTCTGGATT CGCCAGGGTA TCAAGGCGCG CCGCACCCGT
AATGAAGGGC GCGTGCGGGC GTTAAAAGCG ATGCGTCGTG AACGCAGCGA GCGCCGGGAA
GTGATGGGCA CGGCGAAGAT GCAGGTCGAA GAGGCGACGC GCTCCGGTAA AATCGTTTTT
GAGATGGAAA ACGTCGATTA CCAGGTAGAA GGAAAACAAC TGGTAAAAGA TTTCTCCGCT
CAGGTACAGC GCGGCGACAA GATTGCGTTA ATTGGCCCGA ACGGCTGCGG TAAAACCACG
CTACTGAAAC TGATGCTGGG ACAGCTTCAG GCTGACAGCG GGCGCATCCA CGTAGGAACG
AAGCTGGAAG TCGCCTACTT CGATCAGCAT CGCGCCGAAC TGGATCCGGA AAAAACCGTG
ATGGATAACC TTGCGGAAGG CAAGCAAGAG GTGATGGTAA ACGGTAAGCC GCGCCATGTA
CTGGGCTATT TGCAGGACTT CCTGTTTCAC CCCAAACGGG CGATGACACC CGTCCGTGCG
CTTTCCGGCG GCGAACGTAA CCGTCTGCTG CTGGCACGAC TGTTCCTCAA GCCGAGCAAT
CTTTTAATTC TCGATGAACC AACGAACGAT CTTGACGTCG AAACGCTGGA ACTATTAGAA
GAATTAATTG ATGGCTATCA GGGCACGGTA CTACTGGTCA GCCACGATCG GCAATTTGTC
GATAATACCG TGACGGAATG CTGGATTTTC GAGGGCGGCG GCAAAATCGG ACGTTATATC
GGCGGCTACC ATGATGCGCG TGCGCAGCAA GAGCAGCATC TGGCGACGAA ACAGCCGATG
GCGAAAAAAA ATGAGGAAGT TATTGCCCCT AAAGCAGAAA TTGTAAAACG TGGCAGTAGC
AAACTAAGCT ATAAACTGCA GCGCGAGCTG GAGCAGTTAC CCGGTCAGCT TGAAGACCTG
GAAGCGAAGC TGGAAGCGCT ACAGGCGCAG GTTGCGGATG CGGCCTTTTT TAGCCAACCC
CATGAGCAAA CGCAAAAAGT TCTGGCCGAT TTAAGTCAGG CGGAGCAAGA ACTTGAGCAA
GCCTTCGAAC GTTGGGAGTA TCTTGAAGGC CTGAAAAACG GGGCATAA
 
Protein sequence
MSLISMHGAW LSFSDAPLLD NAELHIEDNE RVCLVGRNGA GKSTLMKILN REQGLDDGRI 
IYEQDLIVAR LQQDPPRNIA GSVYDFVAEG IEEQAEYLKR YHEISRLVMT DPSEKNLNEM
ARVQEQLDHH NLWQLENRIN EVLAQLGLDP NAALSSLSGG WLRKAALGRA LVSNPRVLLL
DEPTNHLDIE TIDWLEGFLK TFNGTIIFIS HDRSFIRNMA TRIVDLDRGK LVTYPGNYDQ
YLLEKEEALR VEELQNAEFD RKLAQEEVWI RQGIKARRTR NEGRVRALKA MRRERSERRE
VMGTAKMQVE EATRSGKIVF EMENVDYQVE GKQLVKDFSA QVQRGDKIAL IGPNGCGKTT
LLKLMLGQLQ ADSGRIHVGT KLEVAYFDQH RAELDPEKTV MDNLAEGKQE VMVNGKPRHV
LGYLQDFLFH PKRAMTPVRA LSGGERNRLL LARLFLKPSN LLILDEPTND LDVETLELLE
ELIDGYQGTV LLVSHDRQFV DNTVTECWIF EGGGKIGRYI GGYHDARAQQ EQHLATKQPM
AKKNEEVIAP KAEIVKRGSS KLSYKLQREL EQLPGQLEDL EAKLEALQAQ VADAAFFSQP
HEQTQKVLAD LSQAEQELEQ AFERWEYLEG LKNGA