Gene SeHA_C1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1153 
Symbol 
ID6491693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1134342 
End bp1134866 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content45% 
IMG OID642741395 
Productattachment/invasion protein 
Protein accessionYP_002045047 
Protein GI194450849 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3637] Opacity protein and related surface antigens 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA TTGCCGTGGC GGTTTTAGTT GGTCTGGCGT TAGGTAGCAT CGGCGTGGCT 
AACGCAGCAG GGTATAAAAA TACCGTTTCA ATTGGATATG CCTACACAGA TTTAAGCGGC
TGGCTTTCCG GTAATGCGAA CGGTGCCAAC ATCAAATATA ACTGGGAAGA TCTGGACAGT
GGATTCGGGG CGATGGGTTC AGTTACATAC ACCTCGGCTG ATGTTAATAA CTATGGGTAT
AAGGTAGGTG ATGCTGATTA TACCTCCCTT CTTGTTGGTC CTTCATACCG TTTTAACGAC
TATCTGAATG CTTACGTGAT GATTGGTGCA GCAAACGGAC ATATTAAGGA TAACTGGGGA
AATTCTGACA ATAAAACCGC CTTTGCTTAT GGGGCAGGTA TTCAGCTTAA CCCGGTTGAA
AATATTGCCG TTAATGCGTC TTATGAGCAT ACAAGTTTTT CCACTGATGC TGACAGTGAC
GTCAAAGCTG GAACCTGGGT GCTTGGCGTA GGTTACAGCT TCTGA
 
Protein sequence
MEKIAVAVLV GLALGSIGVA NAAGYKNTVS IGYAYTDLSG WLSGNANGAN IKYNWEDLDS 
GFGAMGSVTY TSADVNNYGY KVGDADYTSL LVGPSYRFND YLNAYVMIGA ANGHIKDNWG
NSDNKTAFAY GAGIQLNPVE NIAVNASYEH TSFSTDADSD VKAGTWVLGV GYSF