Gene SeHA_C1067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1067 
Symbol 
ID6488521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1055365 
End bp1056786 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content47% 
IMG OID642741309 
Productinner membrane transporter YcaM 
Protein accessionYP_002044961 
Protein GI194449011 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.154382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value0.709783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAATG TGCAGGAAAA ACAGTTGCGA TGGTACAACA TCGCCCTGAT GTCGTTTATT 
ACCGTTTGGG GATTCGGCAA TGTTGTCAAT AACTATGCTA ACCAGGGGTT AGTGGTTGTC
TTCTCCTGGG TGTTTATTTT TGCGCTCTAT TTTATTCCTT ATGCCTTAAT CGTGGGGCAA
CTGGGCTCAA CCTTCAAAGA GGGAAAAGGG GGCGTCAGTA CCTGGATTAA GCATACGATG
GGGCCGGGGT TGGCTTACCT TGCGGCATGG ACCTATTGGG TCGTGCATAT TCCCTACCTG
GCGCAAAAGC CGCAGGCGAT ACTCATTGCA TTGGGATGGG CTTTAAAAGG CGACGGCTCG
TTGATAAAAG AATATACCGT CGTTGCCTTG CAGGGGCTGA CGCTGGCATT GTTTGTTTTC
TTTATGTGGG TTGCTTCCAG AGGGATGAAA TCGCTAAAGG TTGTTGGGTC TGTGGCCGGG
ATTGCCATGT TTATCATGTC AATTTTATAT GTTGTGATGG CAGTGACCGC GCCAGCAATT
ACAAACGTTG AAATTGCGAC CACTAACATC ACCTGGCAGT CATTTATTCC TCATATCGAT
TTTACCTATA TCACCACCAT CTCTATGTTG GTCTTTGCGG TTGGTGGGGC AGAGAAGATC
TCGCCTTACG TTAACCAGAC GCGGAATCCA GGAAAAGAAT TTCCGAAGGG GATGCTCTTT
TTAGCCGTCA TGGTTGCGGT CTGCGCTATC CTCGGTTCGT TGGCGATGGG AATGATGTTT
GATTCCCGGC ATATACCTGA CGATTTAATG ACCAATGGGC AATATTATGC ATTCCAGAAA
TTGGGTGAGT ATTACCATAT GGGTAATTCA TTAATGGTGA TTTATGCCAT TGCCAATACT
CTGGGGCAAA TCGCCGCGCT GGTGTTTTCT ATTGATGCGC CACTGAAAGT CTTACTGGGT
GATGCAGACA GTAAATATAT CCCGCAGCGC TTATGTCGTA CTAACGCTTC AGGTACACCA
GTTAACGGTT ATTTGCTGAC ATTAGTGTTG GTCGCTATCT TGATTATGTT GCCAACGCTT
GGCATCGGCG ATATGAACAA CCTGTACAAA TGGCTGCTTA ATCTCAACTC AGTTGTTATG
CCGCTGCGCT ATCTGTGGGT ATTTGTCGCC TTTATTGCCG TCATTCGACT GGCGCAAAAG
TACAAACCCG AATATGTGTT TATTCGCAAC CGGGCGTTGG CGTTAACTGT GGGGATATGG
TGTTTTGCCT TCACCGCGTT TGCCTGCCTT ACCGGTATTT TCCCCAAAAT GGAGGCGTTC
ACACCGGAGT GGACATTCCA GCTGACGTTG AACATCGTGA CGCCTTTTGT CCTGGTCGGG
TTGGGATTAA TTTTCCCACT GCTGGCGCGT AGAAACACAT AA
 
Protein sequence
MPNVQEKQLR WYNIALMSFI TVWGFGNVVN NYANQGLVVV FSWVFIFALY FIPYALIVGQ 
LGSTFKEGKG GVSTWIKHTM GPGLAYLAAW TYWVVHIPYL AQKPQAILIA LGWALKGDGS
LIKEYTVVAL QGLTLALFVF FMWVASRGMK SLKVVGSVAG IAMFIMSILY VVMAVTAPAI
TNVEIATTNI TWQSFIPHID FTYITTISML VFAVGGAEKI SPYVNQTRNP GKEFPKGMLF
LAVMVAVCAI LGSLAMGMMF DSRHIPDDLM TNGQYYAFQK LGEYYHMGNS LMVIYAIANT
LGQIAALVFS IDAPLKVLLG DADSKYIPQR LCRTNASGTP VNGYLLTLVL VAILIMLPTL
GIGDMNNLYK WLLNLNSVVM PLRYLWVFVA FIAVIRLAQK YKPEYVFIRN RALALTVGIW
CFAFTAFACL TGIFPKMEAF TPEWTFQLTL NIVTPFVLVG LGLIFPLLAR RNT