Gene SeHA_C1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1063 
Symbol 
ID6487737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1049712 
End bp1052156 
Gene Length2445 bp 
Protein Length814 aa 
Translation table11 
GC content53% 
IMG OID642741305 
Productanaerobic dimethyl sulfoxide reductase chain a 
Protein accessionYP_002044957 
Protein GI194449802 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0105709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTA AGATCCCTGA TGCCGTGCTG GCAGCCGAGG TGAGCCGTCG TGGTTTAGTC 
AAAACCACCG CGATAGGCGG CCTGGCGATG GCCAGTAGCG CATTTACCCT GCCATTTACC
CGCATCGCTA ACGCCGCAGA GGCAATAAGC CCGGCGAAAA CCGGCGAGAA AGTCGTCTGG
AGCGCCTGTA CGGTAAACTG TGGCAGCCGT TGTCCGCTAC GTATGCATGT TTTGGATGGC
GAAATCAAAT ATGTTGAAAC GGATAATACC GGAAACGATG ATTACGATGG CCTGCACCAG
GTTCGCGCCT GCCTGCGCGG TCGTTCTATG CGTCGTCGCG TCTATAACCC GGATCGGCTC
AAGTATCCGA TGAAGCGCGT CGGCGCGCGC GGCGAAGGTA AATTTGAGCG TATTAGCTGG
GACGAAGCCT ACGATATCAT TGCCACCAAT ATGCAGCGTC TTATCAAAGA GTATGGCAAC
GAGTCCATTT ATCTGAACTA TGGCACGGGA ACGCTGGGCG GCACTTTGAC ACGTTCATGG
CCGCCAGGAA AAACGCTGGT CGCTCGTCTG ATGAACTGCT GCGGCGGTTA TCTTAACCAC
TACGGTGATT ACTCTTCCGC GCAAATCGCA GCGGGTCTGA ACTACACCTA TGGCGGCTGG
GCGGATGGCA ATAGTCCATC CGACATTGAA AACAGTAAGC TGGTGGTATT GTTTGGTAAT
AACCCTGGCG AAACCCGCAT GAGCGGGGGC GGTGTAACCT ATTATCTTGA ACAGGCGCGG
CAGAAATCAA ACGCGCGGAT GATCATTATC GATCCTCGTT ACACCGACAC CGGCGCCGGT
CGCGAAGATG AGTGGATTCC GATTCGTCCA GGTACCGATG CGGCGTTGGT CAATGGTCTG
GCATATGTCT TAATCACCGA GAACATGGTC GATCAGCCGT TCCTGGATAA ATATTGCGTC
GGTTATGACG AAAAAACCTT GCCTGCCAGC GCGCCGAAAA ACGGTCACTA CAAAGCCTAT
ATTCTGGGCC AGGGTAAAGA CGGTATTGCG AAGACGCCGG AGTGGGCGGC GCAAATTACC
GGTATTCCGG CAGATCGCAT TATTAAACTG GCGCGAGAAA TCGGCAGCGC TAAACCCGCC
TATATTTGCC AGGGGTGGGG GCCACAACGT CATGCTAATG GAGAAATCGC CACGCGCGCC
ATCTCGATGC TGGCGATCCT GACGGGTAAT GTTGGGATTA ACGGCGGTAA CAGCGGCGCG
CGCGAAGGGT CGTATGCCCT GCCATTTGAA CGTATGCCCA CGTTAGAAAA CCCGGTTGAA
ACCAGCATCT CCATGTTTAT GTGGACCGAT GCCATTGAAC GCGGCCCGGA AATGACGGCG
CTGCGTGATG GCGTGCGGGG GAAAGATAAG CTGGACGTGC CGATTAAAAT GATCTGGAAC
TATGCTGGCA ACTGTTTGAT TAACCAGCAC TCTGAGATTA ACCGCACCCA CGAAATCCTG
CAGGATGACA AGAAATGCGA AATGATCGTC GTTATCGACT GTCATATGAC CTCGTCGGCA
AAATACGCCG ATATTCTGTT GCCGGATTGC ACTGCTTCTG AGCAGATGGA CTTTGCGCTG
GATGCCTCCT GCGGGAACAT GTCTTACGTT ATCTTCACTG ACCAGGCAAT TAAACCGCGC
TTCGAGTGTA AGACGATTTA TGAGATGACC AGCGAACTGG CGAAACGTCT TGGCGTGGAA
CAACAGTTTA CCGAAGGACG GACGCAAGAA GAGTGGATGC GTCATCTGTA CGAACAGTCG
CGTAAATCCA TTCCGAATCT GCCCACCTTT GAGGAGTTTC GTAAGCAAGG CATCTTCAAA
CAGCGCGACC CCGAAGGCCA CCATGTCGCC TATAAAGACT TCCGCGAAGA TCCGCAAGCG
AATCCACTTA CAACGCCATC GGGCAAGATT GAAATCTATT CACAGGCGTT GGCGGATATC
GCCGCTACCT GGGAGCTGCC GGAAGGCGAC GTGATCGATC CATTACCGAT CTACACGCCA
GGTTTTGAAA ACTATAACGA TCCGCTAACG GATAAATTCC CGCTGCAGTT GACGGGTTTC
CACTATAAAG CGCGTGTGCA TTCCACTTAT GGCAACGTAG ACGTACTGAA AGCCGCCTGT
CGCCAGGAAA TGTGGATTAA CCCAATGGAT GCGCAGAAAC GCGGTATCAA CAATGGCGAT
AAAGTCCGCA TCTTCAACGA TCGTGGCGAA GTTCATATCG AGGCTAAAGT GACGCCGCGC
ATGATGCCGG GTGTGGTCGC CCTGGGAGAA GGCGCATGGT ATGACCCGGA TGCAAAACGC
GTGGATCAGG GCGGATGTAT TAACGTACTG ACGACCCAAC GTCCTTCTCC GCTGGCGAAG
GGGAACCCGT CACATACGAA CCTCGTTCAG GTTGAAAAGG CGTAA
 
Protein sequence
MKTKIPDAVL AAEVSRRGLV KTTAIGGLAM ASSAFTLPFT RIANAAEAIS PAKTGEKVVW 
SACTVNCGSR CPLRMHVLDG EIKYVETDNT GNDDYDGLHQ VRACLRGRSM RRRVYNPDRL
KYPMKRVGAR GEGKFERISW DEAYDIIATN MQRLIKEYGN ESIYLNYGTG TLGGTLTRSW
PPGKTLVARL MNCCGGYLNH YGDYSSAQIA AGLNYTYGGW ADGNSPSDIE NSKLVVLFGN
NPGETRMSGG GVTYYLEQAR QKSNARMIII DPRYTDTGAG REDEWIPIRP GTDAALVNGL
AYVLITENMV DQPFLDKYCV GYDEKTLPAS APKNGHYKAY ILGQGKDGIA KTPEWAAQIT
GIPADRIIKL AREIGSAKPA YICQGWGPQR HANGEIATRA ISMLAILTGN VGINGGNSGA
REGSYALPFE RMPTLENPVE TSISMFMWTD AIERGPEMTA LRDGVRGKDK LDVPIKMIWN
YAGNCLINQH SEINRTHEIL QDDKKCEMIV VIDCHMTSSA KYADILLPDC TASEQMDFAL
DASCGNMSYV IFTDQAIKPR FECKTIYEMT SELAKRLGVE QQFTEGRTQE EWMRHLYEQS
RKSIPNLPTF EEFRKQGIFK QRDPEGHHVA YKDFREDPQA NPLTTPSGKI EIYSQALADI
AATWELPEGD VIDPLPIYTP GFENYNDPLT DKFPLQLTGF HYKARVHSTY GNVDVLKAAC
RQEMWINPMD AQKRGINNGD KVRIFNDRGE VHIEAKVTPR MMPGVVALGE GAWYDPDAKR
VDQGGCINVL TTQRPSPLAK GNPSHTNLVQ VEKA