Gene SeHA_C1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1058 
Symbollrp 
ID6488756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp1041106 
End bp1041600 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content49% 
IMG OID642741300 
Productleucine-responsive transcriptional regulator 
Protein accessionYP_002044952 
Protein GI194448949 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000658641 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGATA GCAAGAAGCG CCCTGGCAAA GATCTCGACC GTATCGATCG TAACATTCTT 
AATGAACTGC AAAAGGATGG GCGTATTTCC AACGTCGAGC TTTCTAAACG AGTAGGACTT 
TCGCCGACAC CTTGCCTTGA GCGTGTGCGT CGGCTGGAGC GACAGGGGTT TATCCAGGGC 
TATACGGCGC TGTTGAACCC GCATTATCTG GATGCGTCAC TTCTGGTATT CGTTGAGATT 
ACCTTAAATC GCGGCGCGCC GGATGTGTTT GAACAGTTTA ATGCCGCCGT GCAAAAGCTT 
GAAGAGATTC AGGAGTGTCA TTTGGTTTCC GGCGATTTCG ACTACCTGTT GAAAACCCGT 
GTACCGGATA TGTCAGCGTA TCGAAAACTA TTGGGAGAGA CGTTGCTGCG CTTGCCAGGT 
GTGAACGACA CCCGAACTTA CGTAGTGATG GAAGAGGTAA AACAGAGTAA TCGTCTGGTT 
ATTAAGACAC GCTAA
 
Protein sequence
MVDSKKRPGK DLDRIDRNIL NELQKDGRIS NVELSKRVGL SPTPCLERVR RLERQGFIQG 
YTALLNPHYL DASLLVFVEI TLNRGAPDVF EQFNAAVQKL EEIQECHLVS GDFDYLLKTR 
VPDMSAYRKL LGETLLRLPG VNDTRTYVVM EEVKQSNRLV IKTR