Gene SeHA_C1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1039 
Symbol 
ID6491974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp1023164 
End bp1024282 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content53% 
IMG OID642741281 
Productmacrolide transporter subunit MacA 
Protein accessionYP_002044934 
Protein GI194450430 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.303516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCTA AGGGAAAGAA ATTTAAAAAG CGTTATCTGG TCATTATTTT AATTCTTTTA 
GTGGGGGGGA TGGCTGGCTG GCGAATGATA AATGCGCCGC TGCCAACTTA TCAGACATTA
ATCGTGCGGC CAGGCGATCT TGAACAGAGT GTACTGGCGA CTGGAAAACT GGACGCGTTG
CGTAAAGTGG ATGTCGGCGC GCAGGTGAGC GGCCAGTTGA AAACGCTGCT GGTCTCCATT
GGCGATAACG TTAAAAAAGA TCAGCTACTC GGCGTGATTG ACCCAGATCA GGCGGAGAAC
CAGATAAAAG AGGTCGAGGC CACCCTGATG GAGCTGAACG CGGAGCGTCA GCAGGCAGCC
GCTGAGTTAA AGTTGGCGCG GGTTACGCTG GCGCGCCAGC AGCAGTTAGC TAAGACTCAG
GCGGTATCGC AACAGGATCT GGATACCGCG GCGACGGAGA TGGCGGTTAA ACAGGCGCGT
ATTGGCACCA TAGATGCCCA GATCAAACGT AATCGGGCCT CGTTGGACAC CGCGAAAACC
AACCTGGAAT ATACCCGTAT TGTCGCCCCC ATGGCGGGGG AAGTGACGCA AATCACTACC
CTGCAAGGAC AAACGGTGAT TGCAGCTCAG CAGGCGCCCA ATATTCTGAC GCTGGCGGAT
ATGAGCACCA TGCTGGTAAA AGCGCAGGTC TCGGAAGCGG ACGTGATCCA TCTTCGGGCG
GGGCAGAAAG CATGGTTCAC CATTGCAGGC GATCCGCAAA CGCGCTATGA AGGCGTTTTA
AAAGATATTC TGCCGACGCC GGAAAAGATC AACGACGCTA TTTTTTATTA CGCCCGGTTT
GAAGTGCCGA ATCCCAAAAG AATCTTGCGT CTTGATATGA CCGCGCAGGT TTATATTCAA
CTCATGGATG TCAAAAATGT GTTGATTATT CCTCTCGCCG CGCTTGGCGA ACCGGTGGGC
GGCAATCGTT ATAAAGTGGC GCTGTTGCGT AACGGCGAAA AACGTGAGCG CGAAGTGGTC
ATTGGCGAGC GTAACGATAC AGACGTGGAA GTGGTTAAAG GTCTGGAAGC GGGCGATGAG
GTGATCATCG GCGAAAGCAG GCCAGGAGCG ACGCCATGA
 
Protein sequence
MRAKGKKFKK RYLVIILILL VGGMAGWRMI NAPLPTYQTL IVRPGDLEQS VLATGKLDAL 
RKVDVGAQVS GQLKTLLVSI GDNVKKDQLL GVIDPDQAEN QIKEVEATLM ELNAERQQAA
AELKLARVTL ARQQQLAKTQ AVSQQDLDTA ATEMAVKQAR IGTIDAQIKR NRASLDTAKT
NLEYTRIVAP MAGEVTQITT LQGQTVIAAQ QAPNILTLAD MSTMLVKAQV SEADVIHLRA
GQKAWFTIAG DPQTRYEGVL KDILPTPEKI NDAIFYYARF EVPNPKRILR LDMTAQVYIQ
LMDVKNVLII PLAALGEPVG GNRYKVALLR NGEKREREVV IGERNDTDVE VVKGLEAGDE
VIIGESRPGA TP