Gene SeHA_C1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C1009 
SymbolrimK 
ID6489856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp993828 
End bp994730 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content56% 
IMG OID642741252 
Productribosomal protein S6 modification protein 
Protein accessionYP_002044905 
Protein GI194448602 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID[TIGR00768] alpha-L-glutamate ligases, RimK family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones106 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATTG CCATATTGTC CAGGGATGGA ACGCTCTATT CTTGCAAACG TCTGCGCGAA 
GCGGCGATGC GGCGCGGCCA TCTGGTCGAG ATACTCGATC CTCTTTCCTG CTATATGAAT
ATTAATCCGG CAGCGTCGTC GATCCATTAC AAGGGGCGTC GTCTGCCCCA TTTTGACGCC
GTTATTCCCC GTATTGGTTC GGCCATTACC TTTTATGGTA CCGCTGCGCT ACGTCAGTTT
GAGCTACTGG GTAGCTATCC GCTGAATGAA TCCGTCGCTA TTACCCGCGC GCGCGATAAG
CTGCGATCGC TACAACTTCT GGCGCGCCAG GGGATCGATC TCCCCATTAC CGGGATCGCC
CATTCGCCGG ATGATACCAG CGATCTTATT AAGATGGTTG GCGGGGCGCC GCTGGTCGTG
AAGCTGGTAG AAGGCACGCA AGGGATCGGC GTGGTATTGG CGGAGACGCG TCAGGCTGCT
GAAAGCGTTA TTGATGCGTT TCGGGGGCTC AATGCCCATA TCCTGGTTCA GGAATACATT
GCCGAAGCTA AAGGATGCGA TATTCGTTGT CTGGTCGTCG GCAATGAGGT TGTGGCGGCG
ATTGAGCGGT GCGCGAAAGC CGGTGATTTT CGCTCCAATC TTCATCGTGG CGGGGTGGCC
AGCATCGCGA CGATCACGCC CCGTGAACGG GATATCGCCA TCAAAGCCGC ACAAACGCTG
GGGCTGGATG TGGCGGGTGT CGATATTTTA CGCGCCGCGC GCGGGCCGCT GGTGATGGAG
GTGAATGCCT CGCCGGGACT GGAAGGTATC GAAAAGACTA CGGGCGTAGA TATCGCGGGG
CGAATGATTC AGTGGATAGA ACGTCACGCT ACGCCTGAAT TTTGCCTTAA AATCGGCGGC
TAA
 
Protein sequence
MKIAILSRDG TLYSCKRLRE AAMRRGHLVE ILDPLSCYMN INPAASSIHY KGRRLPHFDA 
VIPRIGSAIT FYGTAALRQF ELLGSYPLNE SVAITRARDK LRSLQLLARQ GIDLPITGIA
HSPDDTSDLI KMVGGAPLVV KLVEGTQGIG VVLAETRQAA ESVIDAFRGL NAHILVQEYI
AEAKGCDIRC LVVGNEVVAA IERCAKAGDF RSNLHRGGVA SIATITPRER DIAIKAAQTL
GLDVAGVDIL RAARGPLVME VNASPGLEGI EKTTGVDIAG RMIQWIERHA TPEFCLKIGG