Gene SeHA_C0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0961 
Symbol 
ID6491052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp947728 
End bp948615 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content55% 
IMG OID642741209 
Productthreonine and homoserine efflux system 
Protein accessionYP_002044862 
Protein GI194449180 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGGT CAACACGTAA ACTACCAGTC TGGTTGCCCA TTTTGGTTTT GCTCATTGCC 
ATGTCCTCTA TTCAGAGTGG CGCTTCACTG GCAAAATCGT TATTTCCTCT TGTCGGCGCG
CCGGGTGTAA CGGCGCTTCG TCTGGCGTTG GGAACGCTTA TCCTTATCGC CTTTTTCAAA
CCCTGGCGTT TGCGTTTTGC CAAAGAGCAG CGGCTGCCTT TACTGTTTTA TGGTCTGTCG
CTGGGCGGGA TGAACTATCT ATTTTATCTG TCGATTCAAA CGGTGCCGTT GGGTATTGCG
GTCGCGCTGG AATTTACCGG TCCTCTGGCG GTCGCGCTGT TTTCATCCCG GCGGCCGGTA
GATTTTATTT GGGTCGTACT GGCTGTGCTT GGACTCTGGT TCCTGCTGCC ATTAGGACAA
GATATGTCTC ACGTCGATCT TACCGGGGCC GCGTTAGCGC TCGGCGCTGG CGCCTGTTGG
GCTGTCTATA TTCTTACCGG CCAGCGAGCA GGCGCGGAAC ATGGTCCGGC CACGGTGGCG
GTAGGCTCGC TGATTGCCGC CATCATTTTC GTGCCGATTG GCGCAGTTCA GGCTGGCGAT
GCGCTATGGC ACTGGTCGAT TCTTCCCTTA GGGTTAGCGG TCGCTGTGCT TTCTACGGCG
CTGCCTTATT CACTGGAAAT GATTGCGCTG ACGCGCCTGC CAACCCGCAC CTTCGGTACG
CTGATGAGCA TGGAACCCGC GCTGGCCGCC GTTTCCGGGA TGATTTTTCT GGGCGAAACG
CTTACGGGCA TACAAATCAT GGCCCTGTGC GCCATCATTG CCGCCTCAAT GGGTTCTACC
CTAACGATTC GACGCGAACC GCAAATTAAA CAAGTTGACG TAAAATAG
 
Protein sequence
MPGSTRKLPV WLPILVLLIA MSSIQSGASL AKSLFPLVGA PGVTALRLAL GTLILIAFFK 
PWRLRFAKEQ RLPLLFYGLS LGGMNYLFYL SIQTVPLGIA VALEFTGPLA VALFSSRRPV
DFIWVVLAVL GLWFLLPLGQ DMSHVDLTGA ALALGAGACW AVYILTGQRA GAEHGPATVA
VGSLIAAIIF VPIGAVQAGD ALWHWSILPL GLAVAVLSTA LPYSLEMIAL TRLPTRTFGT
LMSMEPALAA VSGMIFLGET LTGIQIMALC AIIAASMGST LTIRREPQIK QVDVK