Gene SeHA_C0854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0854 
SymbolgltA 
ID6489901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp844363 
End bp845646 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content53% 
IMG OID642741103 
Producttype II citrate synthase 
Protein accessionYP_002044761 
Protein GI194448581 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value5.51297e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGATA CAAAGGCAAA AATCACCCTT ACTGGTGACA CTGCTATTGA ACTGGATGTG 
CTAAAAGGTA CACTCGGTCA AGATGTTATT GATATTCGTA GTCTCGGTTC AAAAGGAGTT
TTTACTTTTG ACCCTGGTTT CACCTCTACC GCATCCTGCG AATCTAAAAT CACCTTCATC
GACGGCGACG AAGGCATTTT GTTGCATCGC GGTTTCCCGA TTGACCAGCT TGCTACCGAT
TCCAACTATC TGGAAGTCTG TTACATCCTG CTGTACGGCG AAAAACCGAC GCAGGAAGAG
TATGACGAGT TCAGAACGAC AGTCACCCGC CATACGATGA TCCATGAGCA AATCACTCGC
CTGTTCCATG CTTTCCGTCG CGACTCACAT CCGATGGCGG TAATGTGCGG GATCACTGGC
GCGCTGGCGG CGTTCTACCA CGACTCGCTG GATGTGAACA ATCCGCGCCA CCGTGAAATC
GCGGCGTTCC GCCTGCTGTC CAAAATGCCG ACCATGGCGG CGATGTGTTA CAAATATTCC
ATCGGTCAGC CGTTTGTTTA TCCGCGCAAC GACCTTTCCT ACGCCGGTAA CTTCCTGAAC
ATGATGTTCT CCACGCCGTG TGAAACCTAT GAAGTGAATC CGGTACTGGA GCGCGCAATG
GACCGTATTC TGATCCTGCA CGCTGACCAT GAGCAGAACG CCTCTACGTC AACGGTACGT
ACCGCAGGTT CAAGCGGCGC CAACCCGTTC GCCTGCATTG CCGCCGGGAT CGCCTCCCTG
TGGGGACCCG CGCACGGCGG CGCCAACGAA GCCGCGCTGA AAATGCTGGA AGAAATCAGC
TCTGTTAAAC ACATTCCGGA ATTTGTTCGC CGTGCGAAAG ACAAGAATGA TTCTTTCCGC
CTGATGGGCT TCGGTCACCG TGTTTACAAA AACTACGATC CGCGCGCCAC CGTGATGCGT
GAAACCTGCC ACGAAGTGCT GAAAGAGCTG GGCACCAAAG ATGATCTGCT GGAAGTGGCG
ATGGAGCTTG AGCACATTGC GCTCAACGAC CCGTACTTCA TCGAGAAGAA ACTGTACCCG
AACGTAGACT TCTACTCCGG CATCATTCTG AAAGCGATGG GCATTCCATC TTCGATGTTT
ACCGTGATCT TCGCCATGGC GCGTACCGTT GGCTGGATTG CACACTGGAA TGAAATGCAC
ACTGACGGCA TGAAAATCGC CCGTCCTCGT CAGCTGTATA CCGGCTACGA TAAACGCGAT
TTTAAATCGG CGCTGAAGCG TTAA
 
Protein sequence
MADTKAKITL TGDTAIELDV LKGTLGQDVI DIRSLGSKGV FTFDPGFTST ASCESKITFI 
DGDEGILLHR GFPIDQLATD SNYLEVCYIL LYGEKPTQEE YDEFRTTVTR HTMIHEQITR
LFHAFRRDSH PMAVMCGITG ALAAFYHDSL DVNNPRHREI AAFRLLSKMP TMAAMCYKYS
IGQPFVYPRN DLSYAGNFLN MMFSTPCETY EVNPVLERAM DRILILHADH EQNASTSTVR
TAGSSGANPF ACIAAGIASL WGPAHGGANE AALKMLEEIS SVKHIPEFVR RAKDKNDSFR
LMGFGHRVYK NYDPRATVMR ETCHEVLKEL GTKDDLLEVA MELEHIALND PYFIEKKLYP
NVDFYSGIIL KAMGIPSSMF TVIFAMARTV GWIAHWNEMH TDGMKIARPR QLYTGYDKRD
FKSALKR