Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0822 |
Symbol | |
ID | 6488485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 811800 |
End bp | 813998 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642741074 |
Product | ornithine decarboxylase |
Protein accession | YP_002044732 |
Protein GI | 194448190 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.151589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGAAT TAAAAATTGC CGTTAGCCGT CATTGCCCGG ATTGTTTTTC TACACACCGT AATATTGTAA ATGTTGATGA GAGTCGTTTC ATCGACGTGG CTGCCATCGT GTTATCCATC GACGACATTG AACACGGAAA ACTCGATGAA ATCGACGCAA CGGGTTACGG TATTCCCGTG TTTGTCGCGA CTCATGACGA AGGGCGCGTA CCGCCTGAGT ATTTGCCGCG TATCTCTGGT GTATTCGAAT ATAATGAATC CCGTACTGCC TTCTATGGTC GCCAGTTGGA AACCGCAGCA AGCCACTACG AAACGCAGTT ACGCCCGCCG TTTTTCCGCG CGCTGGTGGA TTATGTCAAC CAGGGCAACA GCGCATTTGA CTGCCCGGGG CATCAGGGCG GCGAATTCTT CCGCCGTCAT CCTGCCGGTA ATCAGTTCGT GGAATACTTT GGCGAAACGC TCTTCCGCTC CGACCTATGC AACGCGGACG TGGCGATGGG CGATCTGCTG ATTCACGAAG GCGCGCCTTG CATTGCGCAG CAACATGCGG CGAAAGTCTT TAACGCCGAT AAGACCTACT TTGTGCTGAA CGGGACCTCC TCCTCTAACA AAGTCGTACT CAACGCGCTG TTAACGCCGG GCGATCTGGT ACTGTTTGAC CGTAACAACC ACAAATCTAA CCACCACGGC GCATTATTGC AGGCGGGCGC AACGCCAGTT TATCTGGAAA CCGCGCGTAA CCCGTATGGT TTTATCGGCG GGATCGACGC TCACTGCTTC GAAGAAGATT ACCTGCGCGA GCTGATTAGC GAAGTCGCGC CGCAGCGTGC CCGCGAAGCA CGTCCATTCC GTCTGGCCGT CATCCAGTTA GGCACCTACG ACGGTACCAT TTATAACGCC CGTCAGGTCG TCGATAAAAT TGGTCACCTG TGCGACTACA TCCTGTTTGA CTCCGCCTGG GTCGGCTATG AACAATTTAT TCCGATGATG GCCGATTGTT CGCCGCTGCT GCTGGAACTG AACGAAAACG ATCCGGGTAT TCTGGTGACG CAGTCCGTTC ACAAACAACA AGCCGGTTTC TCCCAGACCT CGCAGATCCA TAAAAAAGAT AGCCATATCA AAGGGCAATC GCGCTACGTT CCGCATAAGC GCATGAACAA CGCCTTTATG ATGCACGCCT CCACCAGCCC GTTCTATCCG CTGTTCGCTG CGCTGGACGT TAACGCCAAA ATGCACGAAG GCGTCAGCGG TCGCAATATG TGGATGGATT GCGTGGTTAA CGGCATCGAT GCCCGTAAAT TGATCCTCGA AAACTGTCAT CACATCCGTC CGTTCGTACC GGAACTGATT GATGGTAAGC CGTGGCAGTC ATACCCGACG TCAGAGATCG CCAGCGATCT GCGCTTCTTC CACTTCGTTC CGGGAGAACA CTGGCATGCG TTTGAAGGCT ATGCCGAACA TCAGTACTTT GTCGACCCTT GCAAACTGCT GCTCACCACA CCGGGCATTA ATGCAGCGAG CGGCGAATAT GAAGACTTTG GCGTTCCTGC CACGATCCTC GCCAACTTCC TGCGCGAGAA CGGCGTTGTG CCGGAAAAAT GCGACCTCAA CTCCATTCTG TTCCTGCTGA CGCCGGCAGA AGACATGGCG AAGTTACAAC AGCTTGTCGC CCTGCTGGCT CGTTTCGAAA AACTGCTGGA AGCTGATGCG CCGTTAGCGG AAGTATTACC GTCCATCTAC AAACAGCATG AAGCGCGTTA TGCCGGCTAT ACCCTGCGTC AGCTTTGCCA GGAGATGCAC GATCTCTATG CGCGGCACAA CGTGAAACAG CTGCAAAAAG AGATGTTCCG TAAATCGCAT TTCCCGAAAG TCAGTATGAA TCCGCAAGAG GCCAACTATG CCTATCTGCG CGGCGAGGTC GAACTGGTTC GCCTGCCGGA AGCGGAAGGT CGTATCGCGG CTGAAGGCGC TCTGCCTTAC CCGCCGGGAG TGCTGTGTGT AGTTCCGGGT GAAATCTGGG GCGGTTCTGT CCTGCGTTAC TTCAGCGCCC TGGAAGAAGG GATCAACCTG CTGCCGGGCT TTGCGCCTGA ACTGCAGGGC GTTTATATCG AAGAACACGA CGGCCGTAAG CAGGTCTGGT GCTACGTCAT TAAACCTCGT GACGCGCAGC GCTCCCTGCT GAAGGAGGAA AAATTATGA
|
Protein sequence | MSELKIAVSR HCPDCFSTHR NIVNVDESRF IDVAAIVLSI DDIEHGKLDE IDATGYGIPV FVATHDEGRV PPEYLPRISG VFEYNESRTA FYGRQLETAA SHYETQLRPP FFRALVDYVN QGNSAFDCPG HQGGEFFRRH PAGNQFVEYF GETLFRSDLC NADVAMGDLL IHEGAPCIAQ QHAAKVFNAD KTYFVLNGTS SSNKVVLNAL LTPGDLVLFD RNNHKSNHHG ALLQAGATPV YLETARNPYG FIGGIDAHCF EEDYLRELIS EVAPQRAREA RPFRLAVIQL GTYDGTIYNA RQVVDKIGHL CDYILFDSAW VGYEQFIPMM ADCSPLLLEL NENDPGILVT QSVHKQQAGF SQTSQIHKKD SHIKGQSRYV PHKRMNNAFM MHASTSPFYP LFAALDVNAK MHEGVSGRNM WMDCVVNGID ARKLILENCH HIRPFVPELI DGKPWQSYPT SEIASDLRFF HFVPGEHWHA FEGYAEHQYF VDPCKLLLTT PGINAASGEY EDFGVPATIL ANFLRENGVV PEKCDLNSIL FLLTPAEDMA KLQQLVALLA RFEKLLEADA PLAEVLPSIY KQHEARYAGY TLRQLCQEMH DLYARHNVKQ LQKEMFRKSH FPKVSMNPQE ANYAYLRGEV ELVRLPEAEG RIAAEGALPY PPGVLCVVPG EIWGGSVLRY FSALEEGINL LPGFAPELQG VYIEEHDGRK QVWCYVIKPR DAQRSLLKEE KL
|
| |