Gene SeHA_C0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0560 
Symbol 
ID6492356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp561354 
End bp562172 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content55% 
IMG OID642740825 
Producthypothetical protein 
Protein accessionYP_002044492 
Protein GI194450968 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.62907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTC TGGCAGCATT TGATATGGAT GGCACGTTAT TAATGCCCGA TCACCATTTG 
GGTAGAGAAA CGATCGCCAC GCTGGCGCGT CTGCGCGAAC GCGATATCAC CCTGACATTC
GCTACGGGTC GTCATGTGCT GGAAATGCGG CATATTCTGG GGACGCTTTC ACTGGATGCT
TATCTTATTA CCGGTAACGG GACGCGAATT CACTCGCTGG AAGGCGACGT GCTGCATCGT
CAGGATCTCG ATCCTCAGGT TGCCGATACG GTGATGCACC ATGCCTGGGA TACCCGAGCC
AGTATGCATG TGTTTAATGA CAACGGCTGG TTTACAGGCC AGGAGATCCC CGCGCTACTC
CAGGCGCACG TCTACAGCGG CTTTCGTTAT CAGGTTATCG ATATAAAAAG CATTCCGGCC
CATCAGGTGA CGAAGATCTG TTTTTGCGGC GATCATGACG ATCTGATCCG TTTGCGCATT
CAGCTCAATG AGGCGCTGGA AGAACGCGCG CACCTCTGTT TCTCTGCCGT CGACTGCCTG
GAAGTGCTAC CGCTGGGGTG CAATAAAGGA TCGGCGCTGG CGGTATTGAG CAACCATTTA
GGGCTTTCAC TGGCAGATTG CATGGCGTTT GGCGACGCGA TGAACGATCG GGAAATGCTG
GGCAGCGTCG GGCGGGGGCT CATTATGGGC AATGCCATGC CGCAGCTTAT CGCCGCGCTG
CCACACCTTT CGGTTATCGG ACATTGTGGT AATCAAGCGG TATCACACTT TTTGACGCAT
TGGCTGGACA ATCCGCATCT ACCTTATTCC CCCGAATGA
 
Protein sequence
MARLAAFDMD GTLLMPDHHL GRETIATLAR LRERDITLTF ATGRHVLEMR HILGTLSLDA 
YLITGNGTRI HSLEGDVLHR QDLDPQVADT VMHHAWDTRA SMHVFNDNGW FTGQEIPALL
QAHVYSGFRY QVIDIKSIPA HQVTKICFCG DHDDLIRLRI QLNEALEERA HLCFSAVDCL
EVLPLGCNKG SALAVLSNHL GLSLADCMAF GDAMNDREML GSVGRGLIMG NAMPQLIAAL
PHLSVIGHCG NQAVSHFLTH WLDNPHLPYS PE