| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0552 |
|---|
| Symbol | clpX |
|---|
| ID | 6488327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | + |
|---|
| Start bp | 551207 |
|---|
| End bp | 552478 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642740817 |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | YP_002044484 |
|---|
| Protein GI | 194451482 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0114399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 88 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATA AACGCAAAGA TGGCTCGGGC AAATTGTTGT ACTGCTCTTT TTGCGGCAAA
AGCCAGCATG AAGTGCGCAA GCTGATTGCC GGTCCATCCG TGTATATCTG CGACGAATGC
GTCGATTTAT GTAACGACAT TATTCGCGAA GAAATTAAAG AAGTTGCTCC GCACCGTGAA
CGTAGTGCGC TGCCGACGCC GCATGAAATT CGTACCCACC TGGACGATTA CGTTATCGGC
CAGGAGCAGG CGAAAAAAGT GCTGGCGGTG GCGGTCTATA ACCACTACAA GCGTCTGCGT
AACGGCGATA CCAGCAATGG CGTCGAGTTA GGTAAAAGCA ACATTCTGCT GATTGGACCG
ACCGGTTCCG GTAAAACGCT GCTGGCGGAA ACGCTGGCGC GCTTGCTGGA TGTGCCGTTC
ACTATGGCGG ATGCGACCAC GCTAACCGAA GCGGGTTACG TTGGTGAAGA CGTCGAGAAT
ATCATTCAGA AACTGTTGCA GAAATGCGAC TACGACGTGC AAAAAGCGCA GCGTGGGATT
GTCTACATTG ATGAAATCGA TAAGATTTCG CGTAAATCAG ACAATCCGTC CATTACCCGC
GATGTTTCCG GCGAAGGCGT ACAGCAGGCG TTGCTGAAAC TGATCGAAGG CACCGTCGCC
GCGGTTCCAC CGCAGGGCGG TCGCAAACAT CCGCAGCAGG AGTTCTTACA GGTAGATACC
TCTAAGATTC TGTTTATCTG CGGCGGCGCG TTTGCCGGTC TGGATAAAGT GATCGCTAAC
CGTGTTGAAA CCGGCTCCGG CATTGGTTTT GGCGCGACGG TGAAAGCGAA GTCCGACAAA
GCCAGCGAAG GCGAGCTGTT GTCGCAGGTT GAACCGGAAG ATTTGATCAA ATTTGGTCTG
ATTCCTGAGT TTATCGGTCG TCTGCCAGTG GTAGCGACGC TGAATGAACT CAGCGAAGAA
GCGCTGATTC AAATCCTGAA AGAGCCGAAA AATGCGCTGA CCAAGCAGTA TCAGGCGCTG
TTTAACCTGG AAGGCGTCGA TCTGGAATTC CGTGACGAAG CGCTGGACGC TATCGCCAGG
AAAGCAATGG CGCGTAAAAC CGGCGCCCGT GGCCTGCGTT CTATCGTCGA AGCGGCGCTG
CTGGATACCA TGTACGATTT GCCATCTATG GAAGACGTCG AAAAAGTGGT GATCGACGAG
TCCGTTATTG CCGGTCAGAG TAAGCCGTTG CTGATTTACG GCAAACCGGA AGCGCAGGCT
TCTGGCGAAT AA
|
|---|
| Protein sequence | MTDKRKDGSG KLLYCSFCGK SQHEVRKLIA GPSVYICDEC VDLCNDIIRE EIKEVAPHRE
RSALPTPHEI RTHLDDYVIG QEQAKKVLAV AVYNHYKRLR NGDTSNGVEL GKSNILLIGP
TGSGKTLLAE TLARLLDVPF TMADATTLTE AGYVGEDVEN IIQKLLQKCD YDVQKAQRGI
VYIDEIDKIS RKSDNPSITR DVSGEGVQQA LLKLIEGTVA AVPPQGGRKH PQQEFLQVDT
SKILFICGGA FAGLDKVIAN RVETGSGIGF GATVKAKSDK ASEGELLSQV EPEDLIKFGL
IPEFIGRLPV VATLNELSEE ALIQILKEPK NALTKQYQAL FNLEGVDLEF RDEALDAIAR
KAMARKTGAR GLRSIVEAAL LDTMYDLPSM EDVEKVVIDE SVIAGQSKPL LIYGKPEAQA
SGE
|
|---|
| |