Gene SeHA_C0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0505 
Symboltgt 
ID6489791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp507956 
End bp509083 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content52% 
IMG OID642740772 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_002044439 
Protein GI194447736 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00449] tRNA-guanine transglycosylases, various specificities
[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTG AGTTAGATAC CACCGATGGT CGCGCGCGTC GCGGTCGTCT GGTGTTTGAT 
CGTGGCGTAG TGGAAACGCC TGCTTTTATG CCTGTGGGTA CTTACGGTAC CGTGAAAGGC
ATGACGCCGG AAGAAGTGGA AGCGACCGGC GCGCAGATTA TTCTCGGCAA CACTTTCCAC
CTGTGGCTGC GCCCGGGTCA GGAAATCATG AAGCTGCATG GTGACCTGCA CGATTTTATG
CAGTGGAAAG GGCCGATTCT TACCGATTCC GGCGGCTTCC AGGTCTTCAG CCTCGGCGAT
ATTCGTAAGA TTACCGAGCA AGGCGTGCAC TTCCGTAACC CGATCAACGG TGATCCGATT
TTCCTCGATC CGGAAAAGTC GATGGAGATC CAGTACGATC TCGGTTCCGA TATCGTGATG
ATCTTTGATG AATGTACGCC GTACCCGGCA GACTGGGACT ATGCTAAACG CTCGATGGAG
ATGTCGTTGC GTTGGGCGAA GCGTAGCCGC GACCGTTTTG ATAGCCTTGG CAATAAGAAT
GCGCTTTTTG GCATCATTCA GGGCAGCGTT TACGAAGATT TACGCGATAT CTCGGTGAAA
GGTCTGGTAG AGATTGGCTT TGATGGCTAC GCTGTCGGCG GTTTGGCTGT CGGTGAGCCG
AAAGCAGATA TGCACCGCAT TCTGGAGCAC GTTTGCCCGC AGATCCCGGC TGACAAACCG
CGTTACCTGA TGGGCGTGGG CAAACCGGAA GATCTGGTGG AAGGGGTGCG TCGCGGTATT
GATATGTTTG ACTGTGTCAT GCCAACGCGA AATGCCCGTA ATGGTCATCT GTTTGTGACC
GACGGCGTGG TGAAGATTCG TAATGCAAAG CATAAAAGCG ACACCAGCCC GCTTGACGCC
GAGTGCGATT GCTACACCTG TCGCAATTAT TCACGCGCTT ACTTGCATCA TCTCGACCGT
TGCAACGAAA TATTAGGTGC GCGTCTCAAT ACCATTCATA ACTTGCGTTA CTACCAGCGT
TTGATGGCGG GTTTACGCAA GGCTATTGAA GAGGGTAAAT TAGAGAGCTT CGTAACCGAG
TTTTACCAAC GTCAGGGGCG ACCCGTTCCA CCTTTGAACG TTGATTAA
 
Protein sequence
MKFELDTTDG RARRGRLVFD RGVVETPAFM PVGTYGTVKG MTPEEVEATG AQIILGNTFH 
LWLRPGQEIM KLHGDLHDFM QWKGPILTDS GGFQVFSLGD IRKITEQGVH FRNPINGDPI
FLDPEKSMEI QYDLGSDIVM IFDECTPYPA DWDYAKRSME MSLRWAKRSR DRFDSLGNKN
ALFGIIQGSV YEDLRDISVK GLVEIGFDGY AVGGLAVGEP KADMHRILEH VCPQIPADKP
RYLMGVGKPE DLVEGVRRGI DMFDCVMPTR NARNGHLFVT DGVVKIRNAK HKSDTSPLDA
ECDCYTCRNY SRAYLHHLDR CNEILGARLN TIHNLRYYQR LMAGLRKAIE EGKLESFVTE
FYQRQGRPVP PLNVD